RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NDUFB2O95178 105 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SYNGR4O95473 234 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CAPNS1P04632 268 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 HMGN1P05114 100 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 HPNP05981 417 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ADORA3P0DMS8 318 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MAKP20794 623 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MST1P26927 711 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 STARP49675 285 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CARD18P57730 90 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PRPS1P60891 318 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PMP22Q01453 160 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FOXO1Q12778 655 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C1DQ13901 141 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GINS1Q14691 196 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC6A19Q695T7 634 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 HBMQ6B0K9 141 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF770Q6IQ21 691 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC27A4Q6P1M0 643 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SMARCD3Q6STE5 483 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C8orf59Q8N0T1 100 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR13C2Q8NGS9 318 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MFSD8Q8NHS3 518 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 POC1BQ8TC44 478 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CRELD1Q96HD1 420 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SAMD8Q96LT4 415 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 KLHL15Q96M94 604 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TNFRSF13CQ96RJ3 184 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FUZQ9BT04 418 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TSPAN10Q9H1Z9 355 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC6A15Q9H2J7 730 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 EGLN3Q9H6Z9 239 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF703Q9H7S9 590 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FKRPQ9H9S5 495 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MEPEQ9NQ76 525 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ALKBH4Q9NXW9 302 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 H2AFY2Q9P0M6 372 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF229Q9UJW7 825 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NPIPA1Q9UND3 350 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 HDGFL3Q9Y3E1 203 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CORINQ9Y5Q5 1042 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CDH10Q9Y6N8 788 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TNRC6AQ8NDV7 1962 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PTPRQQ9UMZ3 2332 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PCNX3Q9H6A9 2034 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 A0A1W2PRG6 482 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZC3H12DA2A288 527 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C7orf72A4D263 438 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MCIDASD6RGH6 385 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TNFSF11O14788 317 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ACTL6AO96019 429 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IFNGP01579 166 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IL11P20809 199 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CHMP24386 653 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GRPRP30550 384 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RPS6KA3P51812 740 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MYBPHQ13203 477 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PTGES3Q15185 160 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SNAPC1Q16533 368 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF74Q16587 644 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PLEKHN1Q494U1 663 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ANKDD1AQ495B1 522 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C1QL3Q5VWW1 255 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CD300LDQ6UXZ3 194 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 Q6ZS92 163 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PTCHD4Q6ZW05 846 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 H1FNTQ75WM6 255 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MCEMP1Q8IX19 187 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PARP8Q8N3A8 854 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LRRC17Q8N6Y2 441 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR2T33Q8NG76 320 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR5J2Q8NH18 312 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAM81AQ8TBF8 368 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR52D1Q9H346 318 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TVP23BQ9NYZ1 205 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IL20RAQ9UHF4 553 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMEFF2Q9UIK5 374 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 BAIAP2Q9UQB8 552 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CAMK2AQ9UQM7 478 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 HRH3Q9Y5N1 445 aa9.61□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ANKRD11Q6UB99 2663 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IGKV1D-42A0A075B6H8 117 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RIIAD1A6NNX1 92 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LRRN3E7EW58 273 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ADAM10O14672 748 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 EIF1BO60739 113 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GLSO94925 669 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 AKR7A3O95154 331 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IGF2P01344 180 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 BGLAPP02818 100 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CELA3AP09093 270 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 POLR2IP36954 125 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 AQP2P41181 271 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms