RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KPNA4O00629 521 aaPredicted RBP11.64□□□□□ -0.55
CHFR-216ENST00000538235 OR5F1O95221 314 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 CLDN14O95500 239 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 PNMTP11086 282 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 CTSSP25774 331 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 PER3P56645 1201 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 TRIM25Q14258 630 aaKnown RBP11.64□□□□□ -0.55
CHFR-216ENST00000538235 ZNF474Q6S9Z5 364 aaPredicted RBP11.64□□□□□ -0.55
CHFR-216ENST00000538235 NHLRC1Q6VVB1 395 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 ASRGL1Q7L266 308 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 P4HA3Q7Z4N8 544 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 TUSC5Q8IXB3 177 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 OFCC1Q8IZS5 231 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 KDM8Q8N371 416 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 LRRC17Q8N6Y2 441 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 ZIC4Q8N9L1 334 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 STK35Q8TDR2 534 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 DNAJA4Q8WW22 397 aaPredicted RBP11.64□□□□□ -0.55
CHFR-216ENST00000538235 DDIT4LQ96D03 193 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 SLC47A1Q96FL8 570 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 TM9SF2Q99805 663 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 LRMDAQ9H2I8 198 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 TMEM27Q9HBJ8 222 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 ADPRHL2Q9NX46 363 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 RPS6KB2Q9UBS0 482 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 ENPP4Q9Y6X5 453 aa11.64□□□□□ -0.55
CHFR-216ENST00000538235 TRBV4-1A0A0J9YWV2 114 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 AQP7P3A6NL99 342 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 GJE1A6NN92 205 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 HSPB2A8KAH6 182 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 M0R082 166 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 GYG2O15488 501 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 DNAJC8O75937 253 aaPredicted RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 SYNGR4O95473 234 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 IL2RAP01589 272 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 IGFBP2P18065 325 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 AGAP20933 346 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 GRPRP30550 384 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 CLK1P49759 484 aaKnown RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 FOXG1P55316 489 aaPredicted RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 TAS2R41P59536 307 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 LGALS3BPQ08380 585 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 FHL1Q13642 323 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 SEC23BQ15437 767 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 HSPB2Q16082 182 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 SPATS1Q496A3 300 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 SWT1Q5T5J6 900 aaKnown RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 MTFR2Q6P444 385 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 TBPL2Q6SJ96 375 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 C22orf34Q6ZV56 151 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 ADGRG5Q8IZF4 528 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 ARHGAP24Q8N264 748 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 CNEP1R1Q8N9A8 125 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 PIK3C3Q8NEB9 887 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 ZNF417Q8TAU3 575 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 RNF217Q8TC41 542 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 ASB9Q96DX5 294 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 PYURFQ96I23 114 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 DHRS1Q96LJ7 313 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 ZNF385AQ96PM9 386 aaKnown RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 ZNF587Q96SQ5 575 aaPredicted RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 TMEM43Q9BTV4 400 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 EVA1AQ9H8M9 152 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 BCO1Q9HAY6 547 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 MCTS1Q9ULC4 181 aaKnown RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 POMPQ9Y244 141 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 TRAPPC4Q9Y296 219 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 SPIN1Q9Y657 262 aaPredicted RBP11.63□□□□□ -0.55
CHFR-216ENST00000538235 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
CHFR-216ENST00000538235 TRAV36DV7A0A075B6V5 113 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 IGKV3D-15A0A087WSY6 115 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 AHSA1O95433 338 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 IFNA14P01570 189 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 IFNW1P05000 195 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 HLA-DOBP13765 273 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 MAGEA2P43356 314 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 SMSP52788 366 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 SLC16A1P53985 500 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 ZNF74Q16587 644 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 DNAL1Q4LDG9 190 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 OTUD3Q5T2D3 398 aaPredicted RBP11.62□□□□□ -0.55
CHFR-216ENST00000538235 XKRXQ6PP77 449 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 PAQR6Q6TCH4 344 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 FKBP9P1Q75LS8 142 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 FAM214BQ7L5A3 538 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 LUZP2Q86TE4 346 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 EID3Q8N140 333 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 ZNF610Q8N9Z0 462 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 MFSD8Q8NHS3 518 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 ASB5Q8WWX0 329 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 SLCO4A1Q96BD0 722 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 SLC25A36Q96CQ1 311 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 GMPPAQ96IJ6 420 aaPredicted RBP11.62□□□□□ -0.55
CHFR-216ENST00000538235 SFXN3Q9BWM7 321 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 C12orf49Q9H741 205 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 PLEKHB1Q9UF11 243 aaPredicted RBP11.62□□□□□ -0.55
CHFR-216ENST00000538235 PRSS50Q9UI38 385 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms