RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 INTS11Q5TA45 600 aaKnown RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 C1QL3Q5VWW1 255 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 RAET1LQ5VY80 246 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 C8orf82Q6P1X6 216 aaPredicted RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 ZNF585AQ6P3V2 769 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ERICH5Q6P6B1 374 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ARSKQ6UWY0 536 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 CCDC80Q76M96 950 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ZNF550Q7Z398 422 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 PATL1Q86TB9 770 aaKnown RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 CALHM3Q86XJ0 350 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 PTOV1Q86YD1 416 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 GRAMD2AQ8IUY3 354 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 LYSMD2Q8IV50 215 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 OR5M9Q8NGP3 310 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 OR10A6Q8NH74 314 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 NFKBIDQ8NI38 313 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 WDR60Q8WVS4 1066 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 TMEM234Q8WY98 164 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ST8SIA1Q92185 356 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 CNOT9Q92600 299 aaKnown RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 GCDHQ92947 438 aaPredicted RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 REXO5Q96IC2 774 aaKnown RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 MRGPRX4Q96LA9 322 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 DOCK7Q96N67 2140 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ZNF583Q96ND8 569 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 DMRTA2Q96SC8 542 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ZNF607Q96SK3 696 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 SLC39A3Q9BRY0 314 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 EVA1AQ9H8M9 152 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 CALHM2Q9HA72 323 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ACER3Q9NUN7 267 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ALKBH4Q9NXW9 302 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 ERRFI1Q9UJM3 462 aaPredicted RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 TINAGQ9UJW2 476 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 VDAC3Q9Y277 283 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 RPH3AQ9Y2J0 694 aaPredicted RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 ZNF337Q9Y3M9 751 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 L3MBTL1Q9Y468 752 aa5.34□□□□□ -1.55
DDB1-210ENST00000538129 NCOA6Q14686 2063 aaPredicted RBP5.34□□□□□ -1.55
DDB1-210ENST00000538129 CFAP73A6NFT4 308 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 CD8B2A6NJW9 211 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 CLDN24A6NM45 220 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 GJE1A6NN92 205 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 M0QX08 132 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ADAMDEC1O15204 470 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 GMFGO60234 142 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 GCM2O75603 506 aaPredicted RBP5.33□□□□□ -1.56
DDB1-210ENST00000538129 MFN2O95140 757 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 NUDT14O95848 222 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 LDLRP01130 860 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 IFNA14P01570 189 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 PABPC4LP0CB38 370 aaKnown RBP5.33□□□□□ -1.56
DDB1-210ENST00000538129 ZNF708P17019 499 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 AGAP20933 346 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ME2P23368 584 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ELK4P28324 431 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 PCGF2P35227 344 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 APOBEC1P41238 236 aaKnown RBP5.33□□□□□ -1.56
DDB1-210ENST00000538129 SLC1A3P43003 542 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 STARP49675 285 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 LHX2P50458 406 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 MAP2K6P52564 334 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 SMSP52788 366 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 CLDN18P56856 261 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 RPS3AP61247 264 aaKnown RBP5.33□□□□□ -1.56
DDB1-210ENST00000538129 PSME3P61289 254 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 COPZ1P61923 177 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 QPRTQ15274 297 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 TOMM34Q15785 309 aaPredicted RBP5.33□□□□□ -1.56
DDB1-210ENST00000538129 NDUFAF6Q330K2 333 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 MRPL2Q5T653 305 aaKnown RBP5.33□□□□□ -1.56
DDB1-210ENST00000538129 C1orf185Q5T7R7 199 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 EEF1A1P5Q5VTE0 462 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 RTL6Q6ICC9 239 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 DHRS4L2Q6PKH6 230 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 XKRXQ6PP77 449 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 B3GNT6Q6ZMB0 384 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ZNF836Q6ZNA1 936 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 CHMP1BQ7LBR1 199 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 HMGN2P46Q86SG4 172 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 FJX1Q86VR8 437 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 VRK2Q86Y07 508 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ARMC8Q8IUR7 673 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 SLC15A3Q8IY34 581 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ULK2Q8IYT8 1036 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 CLIP4Q8N3C7 705 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 OR2C3Q8N628 320 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 FITM2Q8N6M3 262 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 TMCO5AQ8N6Q1 288 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 OR5M1Q8NGP8 315 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 ZNF563Q8TA94 476 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 POC1BQ8TC44 478 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 BCAS4Q8TDM0 211 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 RASSF5Q8WWW0 418 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 RND1Q92730 232 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 NSL1Q96IY1 281 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 TTYH2Q9BSA4 534 aa5.33□□□□□ -1.56
DDB1-210ENST00000538129 NELFAQ9H3P2 528 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms