RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 UBE2J2Q8N2K1 259 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 ZIC4Q8N9L1 334 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 SMYD1Q8NB12 490 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 BHLHE22Q8NFJ8 381 aaPredicted RBP13.05□□□□□ -0.32
USP28-204ENST00000537642 ELOA3Q8NG57 546 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 OR9K2Q8NGE7 335 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 OR52E4Q8NGH9 312 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 OR10A6Q8NH74 314 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 SF3B5Q9BWJ5 86 aaKnown RBP13.05□□□□□ -0.32
USP28-204ENST00000537642 TRIM2Q9C040 744 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 C12orf10Q9HB07 376 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 MRGBPQ9NV56 204 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 BEX4Q9NWD9 120 aaPredicted RBP13.05□□□□□ -0.32
USP28-204ENST00000537642 ADPRHL2Q9NX46 363 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 MALT1Q9UDY8 824 aa13.05□□□□□ -0.32
USP28-204ENST00000537642 TESQ9UGI8 421 aaKnown RBP13.05□□□□□ -0.32
USP28-204ENST00000537642 MAP1AP78559 2803 aaPredicted RBP13.05□□□□□ -0.32
USP28-204ENST00000537642 IGKV1D-42A0A075B6H8 117 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 M0QX08 132 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 PDLIM1O00151 329 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 FXYD1O00168 92 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 AHSA1O95433 338 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 OPN1SWP03999 348 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 GGT1P19440 569 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 MDH1P40925 334 aaKnown RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 RGS8P57771 180 aaPredicted RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 FAPQ12884 760 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 STK11Q15831 433 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 DUSP7Q16829 419 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 COQ5Q5HYK3 327 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 ALG10BQ5I7T1 473 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 TIMM23BQ5SRD1 257 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 NCMAPQ5T1S8 102 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 REP15Q6BDI9 236 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 NANOGP8Q6NSW7 305 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 C20orf204Q6ZNR8 217 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 TGIF2LYQ8IUE0 185 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 GPR32P1Q8NGA4 272 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 MFSD8Q8NHS3 518 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 DNAJA4Q8WW22 397 aaPredicted RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 TMEM45BQ96B21 275 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 LRRC58Q96CX6 371 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 KTI12Q96EK9 354 aaPredicted RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 ZNF385AQ96PM9 386 aaKnown RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 ZNF317Q96PQ6 595 aaPredicted RBP13.04□□□□□ -0.32
USP28-204ENST00000537642 NANOGQ9H9S0 305 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 SLC7A10Q9NS82 523 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 PARPBPQ9NWS1 579 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 ASB6Q9NWX5 421 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 KLHL14Q9P2G3 628 aa13.04□□□□□ -0.32
USP28-204ENST00000537642 OR5H1A6NKK0 313 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 MRASO14807 208 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 FZD7O75084 574 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 RAD51DO75771 328 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 LGI1O95970 557 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 ITGA5P08648 1049 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 PNMTP11086 282 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 PCGF2P35227 344 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 NCALDP61601 193 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 ADAM8P78325 824 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 PPA1Q15181 289 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 OR1Q1Q15612 314 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 RABL3Q5HYI8 236 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 TSPO2Q5TGU0 170 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 FAM91A1Q658Y4 838 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 ULK3Q6PHR2 472 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 SNX32Q86XE0 403 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 KRTAP1-3Q8IUG1 177 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 P3H2Q8IVL5 708 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 SLC30A8Q8IWU4 369 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 TAAR8Q969N4 342 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 SLC25A36Q96CQ1 311 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 CCL19Q99731 98 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 PIP5K1AQ99755 562 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 ARHGDIGQ99819 225 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 TMUB1Q9BVT8 246 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 PIF1Q9H611 641 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 EVA1AQ9H8M9 152 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 NGBQ9NPG2 151 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 TAS2R16Q9NYV7 291 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 SLC13A4Q9UKG4 626 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 ACANP16112 2415 aa13.03□□□□□ -0.32
USP28-204ENST00000537642 A0A087WUJ7 227 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 A0A0B4J2E0 115 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 LOC100653049A0A140TA62 436 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 A0A1B0GX12 115 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 CIB4A0PJX0 185 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 DPRXA6NFQ7 191 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 CCT8L1PA6NM43 557 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 BBIP1A8MTZ0 92 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 M0R3H8 397 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 HS3ST1O14792 307 aa13.02□□□□□ -0.33
USP28-204ENST00000537642 ATP8B1O43520 1251 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms