RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CEACAM19Q7Z692 300 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 EDAQ92838 391 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 GCDHQ92947 438 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 EBPLQ9BY08 206 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 RHBGQ9H310 441 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC32A1Q9H598 525 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 MRPS30Q9NP92 439 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SIRT7Q9NRC8 400 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 MAN2C1Q9NTJ4 1040 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 GOLT1BQ9Y3E0 138 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF638Q14966 1978 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 KIAA1217Q5T5P2 1943 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SYT5O00445 386 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PDYNP01213 254 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 LIMS3P0CW19 117 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 LIMS4P0CW20 117 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 TPT1P13693 172 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 LPOP22079 712 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 TACR1P25103 407 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 NTSR1P30989 418 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PMELP40967 661 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 LIMS1P48059 325 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PNLIPRP2P54317 469 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PRR5P85299 388 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PJVKQ0ZLH3 352 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 AIMP2Q13155 320 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 HNF4GQ14541 408 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM184AQ6ZMB5 413 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PRSS45Q7RTY3 260 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 IZUMO1Q8IYV9 350 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 FCRL4Q96PJ5 515 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ASB8Q9H765 288 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SEC61A2Q9H9S3 476 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 M0R036 132 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 COCHO43405 550 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 C6orf47O95873 294 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 CRYABP02511 175 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ATP1B1P05026 303 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 IL3P08700 152 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ZP2Q05996 745 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 DLX2Q07687 328 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF345Q14585 488 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 INSL4Q14641 139 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 NOXRED1Q6NXP6 359 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 RAB42Q8N4Z0 105 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 LINC00471Q8N535 108 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 OR10D4PQ8NGN7 298 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 CD200R1Q8TD46 325 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 WDR89Q96FK6 387 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC46A2Q9BY10 475 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 UBQLN3Q9H347 655 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PCDHB1Q9Y5F3 818 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 KPTNQ9Y664 436 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 BRWD1Q9NSI6 2320 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 FAM227AF5H4B4 570 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 GABARAPH6UMI1 98 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 NDUFB6O95139 128 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 GSTM3P21266 225 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 GNALP38405 381 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 F2RL1P55085 397 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 MRPS21P82921 87 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 BDH1Q02338 343 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 MS4A13Q5J8X5 152 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM244Q5VVB8 128 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ACBD4Q8NC06 268 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 OR7G2Q8NG99 324 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 UNKLQ9H9P5 680 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 GNG14A0A1W2PPG7 69 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 SYNDIG1LA6NDD5 238 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 CTSEP14091 401 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 MAT2AP31153 395 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ADPRHP54922 357 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 NDUFA6P56556 154 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 LINC00303Q3SY05 128 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 UBE2NLQ5JXB2 153 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 NSUN5P2Q63ZY6 315 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF776Q68DI1 518 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 LILRA6Q6PI73 481 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 SMARCD3Q6STE5 483 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ARL9Q6T311 187 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 DPPA4Q7L190 304 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 NRROSQ86YC3 692 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 OR8J2Q8NGG1 315 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 NRIP2Q9BQI9 281 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 NAA11Q9BSU3 229 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 FBRSQ9HAH7 460 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ARL15Q9NXU5 204 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 TTC28Q96AY4 2481 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 MGAT4DA6NG13 374 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 OR6C76A6NM76 312 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ANHXE9PGG2 379 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 FLRT2O43155 660 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 OR10H2O60403 315 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 STK16O75716 305 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 HOXB5P09067 269 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 POU2F2P09086 479 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 SFTA3P0C7M3 94 aa10.06□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms