RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OR2G6Q5TZ20 316 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 TIGD3Q6B0B8 471 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF544Q6NX49 715 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 H2BFWTQ7Z2G1 175 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 SLC26A11Q86WA9 606 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF584Q8IVC4 421 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 NUDCD3Q8IVD9 361 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF740Q8NDX6 193 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 TRPV1Q8NER1 839 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 OR9K2Q8NGE7 335 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 RNF139Q8WU17 664 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 CHCHD10Q8WYQ3 142 aaPredicted RBP3.91□□□□□ -1.78
PRKDC-208ENST00000536710 CMTM7Q96FZ5 175 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 IFT74Q96LB3 600 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 CHRDL1Q9BU40 450 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 NARFLQ9H6Q4 476 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 NMRAL1Q9HBL8 299 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 NMRK1Q9NWW6 199 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 B4GALT7Q9UBV7 327 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF639Q9UID6 485 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 KCNIP3Q9Y2W7 256 aa3.91□□□□□ -1.78
PRKDC-208ENST00000536710 IGKV1D-8A0A087WSZ0 117 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 IGHV1OR21-1A0A087WYE8 117 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 NSG1A0A0A6YYJ2 146 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 GFYI3L273 518 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 P04436 131 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 UQCRFS1P1P0C7P4 283 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 ZNF853P0CG23 659 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 ATP1B2P14415 290 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 NPR2P20594 1047 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 RBMXP38159 391 aaKnown RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 GYG1P46976 350 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 KLK7P49862 253 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 MRPL28Q13084 256 aaKnown RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 OR5I1Q13606 314 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 EOGTQ5NDL2 527 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 MARCH8Q5T0T0 291 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 FHL5Q5TD97 284 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 RSBN1Q5VWQ0 802 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 LRRC31Q6UY01 552 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 SCARA5Q6ZMJ2 495 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 FAM228AQ86W67 206 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 OR1L6Q8NGR2 347 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 ZNF564Q8TBZ8 553 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 DNAJA4Q8WW22 397 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 HIST1H4GQ99525 98 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 ARHGDIGQ99819 225 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 RIOK1Q9BRS2 568 aaKnown RBP3.9□□□□□ -1.79
PRKDC-208ENST00000536710 SELENOIQ9C0D9 397 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 TP53TG3Q9ULZ0 132 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 MMP24Q9Y5R2 645 aa3.9□□□□□ -1.79
PRKDC-208ENST00000536710 IGHV3OR16-13A0A075B7E8 117 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 A0A0U1RQS6 177 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 LOC110117498-PIK3R3F6TDL0 507 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 HSD17B6O14756 317 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 HDAC3O15379 428 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 TIMP1P01033 207 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 CD1EP15812 388 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 GABRR1P24046 479 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 CXCR2P25025 360 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 DDOSTP39656 456 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 TIMM10P62072 90 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 TGFBR3Q03167 851 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 RNF212Q495C1 297 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 ZYG11AQ6WRX3 759 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 TGIF2LYQ8IUE0 185 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 RDH10Q8IZV5 341 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 SDR9C7Q8NEX9 313 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 OR2L5Q8NG80 312 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 OR56B2PQ8NGI1 322 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 BRSK1Q8TDC3 778 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 DCUN1D4Q92564 292 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 PANX2Q96RD6 677 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 PLIN2Q99541 437 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 TSG101Q99816 390 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 YTHDF1Q9BYJ9 559 aaKnown RBP3.89□□□□□ -1.79
PRKDC-208ENST00000536710 RNF167Q9H6Y7 350 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 ZDHHC11Q9H8X9 412 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 SH2D2AQ9NP31 389 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 AIG1Q9NVV5 245 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 DCAF16Q9NXF7 216 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 SLC7A8Q9UHI5 535 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 KIF25Q9UIL4 384 aa3.89□□□□□ -1.79
PRKDC-208ENST00000536710 COL2A1P02458 1487 aaPredicted RBP3.89□□□□□ -1.79
PRKDC-208ENST00000536710 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 OR5B21A6NL26 309 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 ZNF780AO75290 641 aaPredicted RBP3.88□□□□□ -1.79
PRKDC-208ENST00000536710 MMP23AO75900 390 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 MMP1P03956 469 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 TPM2P07951 284 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 COX7A1P24310 79 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 CASP14P31944 242 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 SUCLG1P53597 346 aaKnown RBP3.88□□□□□ -1.79
PRKDC-208ENST00000536710 APOC4P55056 127 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 RIPPLY3P57055 190 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 SCRN3Q0VDG4 424 aa3.88□□□□□ -1.79
PRKDC-208ENST00000536710 KDM7AQ6ZMT4 941 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms