RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 NFKBIDQ8NI38 313 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 BBS10Q8TAM1 723 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 THOC1Q96FV9 657 aaKnown RBP12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 ZNF385AQ96PM9 386 aaKnown RBP12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 CCDC28BQ9BUN5 200 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC25A15Q9Y619 301 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 USF3Q68DE3 2245 aa12.57□□□□□ -0.4
RTN3P1-201ENST00000536295 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 M0R1B8 84 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 OVOL3O00110 214 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 CDH2P19022 906 aaPredicted RBP12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 LRIF1Q5T3J3 769 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 PRAMEF8Q5VWM4 474 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 PRAMEF7Q5VXH5 474 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 OR7E24Q6IFN5 339 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC22A25Q6T423 547 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 KLHL17Q6TDP4 642 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 TMEM108Q6UXF1 575 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 SSX8Q7RTT4 187 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 C10orf111Q8N326 155 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC25A36Q96CQ1 311 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 ALG2Q9H553 416 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 BCL2L10Q9HD36 194 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 INTS9Q9NV88 658 aaKnown RBP12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 VAPAQ9P0L0 249 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 RPS6KB2Q9UBS0 482 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 POU2F3Q9UKI9 436 aa12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 NIPBLQ6KC79 2804 aaeCLIP12.56□□□□□ -0.4
RTN3P1-201ENST00000536295 PDLIM1O00151 329 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 AHSA1O95433 338 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 ARAFP10398 606 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 BMP2P12643 396 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 TNK1Q13470 666 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 VEZF1Q14119 521 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 SQLEQ14534 574 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 CLEC12BQ2HXU8 276 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 ZIC4Q8N9L1 334 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 TMEM45BQ96B21 275 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 MUS81Q96NY9 551 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC52A3Q9NQ40 469 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 FAIMQ9NVQ4 179 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 DCTN4Q9UJW0 460 aa12.55□□□□□ -0.4
RTN3P1-201ENST00000536295 ELOA3DA6NLF2 546 aaPredicted RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 TMEM229AB2RXF0 380 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 KRT33AO76009 404 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 CD8AP01732 235 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 ETS2P15036 469 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 PPIBP23284 216 aaKnown RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 PTAFRP25105 342 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 CD40P25942 277 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 GTF2E2P29084 291 aaKnown RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 AQP1P29972 269 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 RPS5P46782 204 aaKnown RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 P2RY4P51582 365 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC25A3Q00325 362 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 CDK6Q00534 326 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 TGFBR3Q03167 851 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 ELOA3BQ3SY89 546 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 REEP3Q6NUK4 255 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 HDXQ7Z353 690 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 COMTD1Q86VU5 262 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 ELOA3Q8NG57 546 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 STK35Q8TDR2 534 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 RADILQ96JH8 1075 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 TRAF4Q9BUZ4 470 aaPredicted RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 RSPO3Q9BXY4 272 aaPredicted RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 IKZF5Q9H5V7 419 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 PRDM4Q9UKN5 801 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 MGAT4BQ9UQ53 548 aa12.54□□□□□ -0.4
RTN3P1-201ENST00000536295 CADP27708 2225 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 EVPLLA8MZ36 301 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 E7EQL1 145 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 TPST1O60507 370 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 NPIPB7O75200 414 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 NDUFS7O75251 213 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 HTR2AP28223 471 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 PCSK6P29122 969 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 MPGP29372 298 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 ACVR1BP36896 505 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 SELENOPP49908 381 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 ATP4BP51164 291 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 SCARB2Q14108 478 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 GLIPR1L2Q4G1C9 344 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 HIKESHIQ53FT3 197 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 NIPAL3Q6P499 406 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms