RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 RBMS2Q15434 407 aaKnown RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 GUCA2BQ16661 112 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 ARHGAP11BQ3KRB8 267 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 TMEM35AQ53FP2 167 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 CCDC157Q569K6 752 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 FAM74A1Q5RGS3 127 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 MANEAQ5SRI9 462 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SPOUT1Q5T280 376 aaKnown RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 NKAIN2Q5VXU1 208 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 TXNDC8Q6A555 127 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SLC48A1Q6P1K1 146 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 LRRN1Q6UXK5 716 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 BIVMQ86UB2 503 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 LSRQ86X29 649 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 GLB1L2Q8IW92 636 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 DCUN1D3Q8IWE4 304 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SLC35F2Q8IXU6 374 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 DND1Q8IYX4 353 aaKnown RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 TMIEQ8NEW7 156 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 NUP43Q8NFH3 380 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 OR52L1Q8NGH7 329 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 OR13C2Q8NGS9 318 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 OR2L2Q8NH16 312 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 OR8K3Q8NH51 312 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 ZNF461Q8TAF7 563 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SYNPRQ8TBG9 265 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 CD99L2Q8TCZ2 262 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 GLYATL2Q8WU03 294 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SFT2D1Q8WV19 159 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 HMGB4Q8WW32 186 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 TMEM239Q8WW34 195 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 RAD51AP1Q96B01 352 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 C10orf90Q96M02 699 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 LRFN5Q96NI6 719 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 FERD3LQ96RJ6 166 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 CD180Q99467 661 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 NRTNQ99748 197 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 GINS4Q9BRT9 223 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 ACTRT3Q9BYD9 372 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 EGLN1Q9GZT9 426 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 OR51V1Q9H2C8 321 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SEMA6CQ9H3T2 930 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 CACYBPQ9HB71 228 aaKnown RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 APMAPQ9HDC9 416 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 PRM3Q9NNZ6 103 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 KRCC1Q9NPI7 259 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 POT1Q9NUX5 634 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 C2orf42Q9NWW7 574 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 KLHL28Q9NXS3 571 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 TAC3Q9UHF0 121 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SLC25A13Q9UJS0 675 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 LSM7Q9UK45 103 aaKnown RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 SLC13A4Q9UKG4 626 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 PLAGL1Q9UM63 463 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 ZNF337Q9Y3M9 751 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 PCYT1BQ9Y5K3 369 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-215ENST00000536145 COL4A2P08572 1712 aa6.36□□□□□ -1.39
CPSF7-215ENST00000536145 TCF20Q9UGU0 1960 aaKnown RBP6.35□□□□□ -1.39
CPSF7-215ENST00000536145 CENPVL1A0A0U1RR11 272 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ABHD14A-ACY1A0A1B0GW23 586 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 LRIT2A6NDA9 550 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ACOD1A6NK06 481 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 RIIAD1A6NNX1 92 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 PRR32B1ATL7 298 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 F8VVB4 439 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 F8VWA3 439 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 H7BY64 318 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 SULT2B1O00204 365 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 MAGEB4O15481 346 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-215ENST00000536145 BNIP3LO60238 219 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 RDH16O75452 317 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 LEFTY1O75610 366 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 SLC25A12O75746 678 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 EIF3GO75821 320 aaKnown RBP eCLIP6.35□□□□□ -1.39
CPSF7-215ENST00000536145 SPDEFO95238 335 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 PPP1R3DO95685 299 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 AIFM1O95831 613 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ZNF735P0CB33 412 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 TMIGD3P0DMS9 266 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-215ENST00000536145 CD37P11049 281 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 BMP7P18075 431 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 CSNK2A2P19784 350 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ACHEP22303 614 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 EDNRAP25101 427 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 PAX6P26367 422 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 BDKRB2P30411 391 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 AGTR1P30556 359 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 HSD17B2P37059 387 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 DIO1P49895 249 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 NR0B1P51843 470 aaKnown RBP6.35□□□□□ -1.39
CPSF7-215ENST00000536145 AKR1D1P51857 326 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ARHGDIBP52566 201 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 HCCSP53701 268 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 PNLIPRP2P54317 469 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 PRKAG1P54619 331 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 PRMT2P55345 433 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 GMFBP60983 142 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ACTA2P62736 377 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 ACTG2P63267 376 aa6.35□□□□□ -1.39
CPSF7-215ENST00000536145 UBE2IP63279 158 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms