RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CCL4L1Q8NHW4 92 aa16.52■□□□□ 0.24
RAB40C-203ENST00000535977 TMEM239Q8WW34 195 aa16.52■□□□□ 0.24
RAB40C-203ENST00000535977 ZNF649Q9BS31 505 aa16.52■□□□□ 0.24
RAB40C-203ENST00000535977 IL21RQ9HBE5 538 aa16.52■□□□□ 0.24
RAB40C-203ENST00000535977 SIDT1Q9NXL6 827 aaKnown RBP16.52■□□□□ 0.24
RAB40C-203ENST00000535977 NDRG3Q9UGV2 375 aa16.52■□□□□ 0.24
RAB40C-203ENST00000535977 HS3ST3A1Q9Y663 406 aa16.52■□□□□ 0.24
RAB40C-203ENST00000535977 FAM86C2PA6NEL3 165 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 H0YGG7 62 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 PIP5K1CO60331 668 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 SIX6O95475 246 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 EGFP01133 1207 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 TFP02787 698 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 GUSBP08236 651 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 CD3GP09693 182 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 ARF3P61204 181 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 GPR18Q14330 331 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 OR1Q1Q15612 314 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 ZNF322Q6U7Q0 402 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 MEPCEQ7L2J0 689 aaKnown RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 SHFQ7M4L6 423 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 LRRC28Q86X40 367 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 SLC43A2Q8N370 569 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 EIF4E3Q8N5X7 224 aaKnown RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 ACBD7Q8N6N7 88 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 BAHD1Q8TBE0 780 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 PBX4Q9BYU1 374 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 NKX6-2Q9C056 277 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 OR52D1Q9H346 318 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 ADAP2Q9NPF8 381 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 HINT3Q9NQE9 182 aaKnown RBP16.52■□□□□ 0.23
RAB40C-203ENST00000535977 EDARQ9UNE0 448 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 PRUNE2Q8WUY3 3088 aa16.52■□□□□ 0.23
RAB40C-203ENST00000535977 TRBV23OR9-2A0A075B6M9 112 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 CDHR4A6H8M9 788 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 CHURC1-FNTBB4DL54 471 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 J3QRE1 110 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 LINC01565O15544 149 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 SULT1B1O43704 296 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 CD53P19397 219 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 DRD1P21728 446 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 DRD5P21918 477 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 CAPZA2P47755 286 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 ERVK-25P63136 954 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 HYAL1Q12794 435 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 TMPRSS11FQ6ZWK6 438 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 LNX2Q8N448 690 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 TOMM5Q8N4H5 51 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 OR10G6Q8NH81 332 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 ZDHHC1Q8WTX9 485 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 MRGPRX1Q96LB2 322 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 ZNF559Q9BR84 538 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 CDC42EP2O14613 210 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 SSX5O60225 188 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 H2AFB1P0C5Y9 115 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 CELP19835 753 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 NT5EP21589 574 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 RFX3P48380 749 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 DHODHQ02127 395 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 HLXQ14774 488 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-203ENST00000535977 MRPL2Q5T653 305 aaKnown RBP16.51■□□□□ 0.23
RAB40C-203ENST00000535977 ZNF613Q6PF04 617 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 SEZ6L2Q6UXD5 910 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 Q6ZTK2 550 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 RNF44Q7L0R7 432 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 SAMD12Q8N8I0 201 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 SPRYD4Q8WW59 207 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-203ENST00000535977 BABAM2Q9NXR7 383 aa16.51■□□□□ 0.23
RAB40C-203ENST00000535977 H0Y8X5 98 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 CYR61O00622 381 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 FABP1P07148 127 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 RBMS1P29558 406 aaKnown RBP16.5■□□□□ 0.23
RAB40C-203ENST00000535977 MAP3K8P41279 467 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 ALG11Q2TAA5 492 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 HFEQ30201 348 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 BTN2A1Q7KYR7 527 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 RPLP0P6Q8NHW5 317 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 NANPQ8TBE9 248 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 ACOT12Q8WYK0 555 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 BCL2L14Q9BZR8 327 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 TMEM27Q9HBJ8 222 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 NKIRAS2Q9NYR9 191 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 SLC6A5Q9Y345 797 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 SCN3AQ9NY46 2000 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 A0A0J9YY10 115 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 OR6C65A6NJZ3 312 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 NDUFS6O75380 124 aaKnown RBP16.5■□□□□ 0.23
RAB40C-203ENST00000535977 NTN1O95631 604 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 TNFP01375 233 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 MT-ND4P03905 459 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 NFYAP23511 347 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-203ENST00000535977 TRAM1Q15629 374 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 PRICKLE4Q2TBC4 344 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 OAFQ86UD1 273 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 TINAGL1Q9GZM7 467 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-203ENST00000535977 MED31Q9Y3C7 131 aa16.5■□□□□ 0.23
RAB40C-203ENST00000535977 ATG2BQ96BY7 2078 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 MCRIP1C9JLW8 97 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 BHLHE40O14503 412 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 NARSO43776 548 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms