RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 CD63P08962 238 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 LIMS3P0CW19 117 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 LIMS4P0CW20 117 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 CD79BP40259 229 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 RPS3AP61247 264 aaKnown RBP17.05■□□□□ 0.32
CLPB-205ENST00000535477 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLPB-205ENST00000535477 DYNC1I2Q13409 638 aaKnown RBP17.05■□□□□ 0.32
CLPB-205ENST00000535477 SSX1Q16384 188 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 ALG10Q5BKT4 473 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 NANOGNBQ7Z5D8 188 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 PPP1R32Q7Z5V6 425 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 LIPHQ8WWY8 451 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 NMNAT3Q96T66 252 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 TBX5Q99593 518 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 SPRY4Q9C004 299 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 NRIP3Q9NQ35 241 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 HIF3AQ9Y2N7 669 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 EXOSC1Q9Y3B2 195 aaKnown RBP17.05■□□□□ 0.32
CLPB-205ENST00000535477 PCDHGA1Q9Y5H4 931 aa17.05■□□□□ 0.32
CLPB-205ENST00000535477 TRAV36DV7A0A075B6V5 113 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 MRPL3P09001 348 aaKnown RBP17.04■□□□□ 0.32
CLPB-205ENST00000535477 PRKCAP17252 672 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 TCEA1P23193 301 aaKnown RBP17.04■□□□□ 0.32
CLPB-205ENST00000535477 PTGDSP41222 190 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 CASP3P42574 277 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 WNT4P56705 351 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 CTXN1P60606 82 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 RPL18Q07020 188 aaKnown RBP17.04■□□□□ 0.32
CLPB-205ENST00000535477 ZNF791Q3KP31 576 aaPredicted RBP17.04■□□□□ 0.32
CLPB-205ENST00000535477 PRAMEF20Q5VT98 475 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 OR51L1Q8NGJ5 315 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 RNF167Q9H6Y7 350 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 SEC14L4Q9UDX3 406 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 MPDZO75970 2070 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 PNMA8CA0A1B0GUJ8 204 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 SLC22A31A6NKX4 558 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 SHISA8B8ZZ34 492 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 IMPA2O14732 288 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 DKK1O94907 266 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 BGLAPP02818 100 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 RPS15P62841 145 aaKnown RBP17.04■□□□□ 0.32
CLPB-205ENST00000535477 TCF15Q12870 199 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 SLC15A4Q8N697 577 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 ATP6V1C2Q8NEY4 427 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 KISS1RQ969F8 398 aaPredicted RBP17.04■□□□□ 0.32
CLPB-205ENST00000535477 Q96M85 177 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 SDHAF3Q9NRP4 125 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 ZNF229Q9UJW7 825 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 WIF1Q9Y5W5 379 aa17.04■□□□□ 0.32
CLPB-205ENST00000535477 TEX13CA0A0J9YWL9 993 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 CCDC182A6NF36 153 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 A8MVM7 634 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 SSPNQ14714 243 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 LIPKQ5VXJ0 399 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 ATCAYQ86WG3 371 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 PSD4Q8NDX1 1056 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 DEFB124Q8NES8 71 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 SMAP2Q8WU79 429 aaPredicted RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 RNF138Q8WVD3 245 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 ASB15Q8WXK1 588 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 ZHX1-C8orf76Q96EF9 292 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 FKRPQ9H9S5 495 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 KLHL21Q9UJP4 597 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 YARS2Q9Y2Z4 477 aaKnown RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 SPIN1Q9Y657 262 aaPredicted RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 ZNF318Q5VUA4 2279 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 TMEM129A0AVI4 362 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 C12orf71A8MTZ7 269 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 TNFRSF10AO00220 468 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 TP53I11O14683 189 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 TNFSF15O95150 251 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 RAB40ALP0C0E4 278 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 SLC2A5P22732 501 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 UQCRC1P31930 480 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 HTR3AP46098 478 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 MLLT11Q13015 90 aaPredicted RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 EIF3IQ13347 325 aaKnown RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 C1orf140Q5VVS0 124 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 RPS19BP1Q86WX3 136 aaKnown RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 ZPLD1Q8TCW7 415 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 ST8SIA1Q92185 356 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 DTNBP1Q96EV8 351 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 CENPOQ9BU64 300 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 PTDSS2Q9BVG9 487 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 ERVK13-1Q9NX77 482 aa17.03■□□□□ 0.32
CLPB-205ENST00000535477 CHCHD2Q9Y6H1 151 aaPredicted RBP17.03■□□□□ 0.32
CLPB-205ENST00000535477 CACNA1HO95180 2353 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 C11orf98E9PRG8 122 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 ARPC3O15145 178 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 IGHA1P01876 353 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 CD14P08571 375 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 F8A1P23610 371 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 SUMO3P55854 103 aaPredicted RBP17.02■□□□□ 0.32
CLPB-205ENST00000535477 FAM69AQ5T7M9 428 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 OPN5Q6U736 354 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 MARCH9Q86YJ5 346 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 TMEM156Q8N614 296 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 TMEM99Q8N816 258 aa17.02■□□□□ 0.32
CLPB-205ENST00000535477 LRRC75AQ8NAA5 344 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms