RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	RBBP4	Q09028	425 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	KLRB1	Q12918	225 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	FAM83E	Q2M2I3	478 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	TMEM52B	Q4KMG9	183 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	TP53I3	Q53FA7	332 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	TEX44	Q53QW1	395 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.89	□□□□□ -1.79
ATM-223	ENST00000533979	SCYL2	Q6P3W7	929 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	CYS1	Q717R9	158 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	CCDC50	Q8IVM0	306 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	GABRG1	Q8N1C3	465 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	FBXL16	Q8N461	479 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	DHRSX	Q8N5I4	330 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF248	Q8NDW4	579 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	OR4D10	Q8NGI6	311 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	OR1K1	Q8NGR3	316 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	RPLP0P6	Q8NHW5	317 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	LKAAEAR1	Q8TD35	194 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	CDX2	Q99626	313 aa	Predicted RBP	3.89	□□□□□ -1.79
ATM-223	ENST00000533979	GPR174	Q9BXC1	333 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	TEKT3	Q9BXF9	490 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	DUSP16	Q9BY84	665 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	IL22	Q9GZX6	179 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	ANKRD19P	Q9H560	264 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	ELOVL6	Q9H5J4	265 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	BICC1	Q9H694	974 aa	Known RBP	3.89	□□□□□ -1.79
ATM-223	ENST00000533979	LYRM4	Q9HD34	91 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	MAN2C1	Q9NTJ4	1040 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	MTCH1	Q9NZJ7	389 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	EMC3	Q9P0I2	261 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	GALP	Q9UBC7	116 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	C15orf41	Q9Y2V0	281 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	STARD10	Q9Y365	291 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	ALG6	Q9Y672	507 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	PRSS21	Q9Y6M0	314 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	TOGARAM1	Q9Y4F4	1720 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	FRMPD4	Q14CM0	1322 aa		3.89	□□□□□ -1.79
ATM-223	ENST00000533979	THSD7B	Q9C0I4	1608 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SBF1	O95248	1867 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	DOT1L	Q8TEK3	1739 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979		A0A1B0GU03	582 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979		A0A1W2PPV9	198 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	OR6C74	A6NCV1	312 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	OR6C65	A6NJZ3	312 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	TEX46	H3BTG2	121 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	PSMD11	O00231	422 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	WWP2	O00308	870 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	DLGAP1	O14490	977 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SURF4	O15260	269 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CHMP2A	O43633	222 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SULT1B1	O43704	296 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CD48	P09326	243 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CLTA	P09496	248 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	BCKDHA	P12694	445 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF26	P17031	533 aa	Predicted RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	GSTM3	P21266	225 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CD1C	P29017	333 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CDH5	P33151	784 aa	Predicted RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SAA4	P35542	130 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	MNAT1	P51948	309 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ACLY	P53396	1101 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CSNK2B	P67870	215 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	PAX5	Q02548	391 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	RGS1	Q08116	209 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	TAB1	Q15750	504 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	PPP1R3A	Q16821	1122 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	KNOP1	Q1ED39	458 aa	Known RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SLC5A12	Q1EHB4	618 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SLC25A52	Q3SY17	297 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	CCDC14	Q49A88	953 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	UNC50	Q53HI1	259 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SLC8B1	Q6J4K2	584 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF600	Q6ZNG1	722 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	COMTD1	Q86VU5	262 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	LINC01561	Q8N1V8	128 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	RNF10	Q8N5U6	811 aa	Known RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	OR1B1	Q8NGR6	318 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	MARCH1	Q8TCQ1	289 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	DTX3L	Q8TDB6	740 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ARNTL2	Q8WYA1	636 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	DYRK2	Q92630	601 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	RAB1C	Q92928	201 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	TOP1MT	Q969P6	601 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	NTNG2	Q96CW9	530 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	SDSL	Q96GA7	329 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	MSANTD3	Q96H12	275 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	TIMD4	Q96H15	378 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ZBED3	Q96IU2	234 aa	Predicted RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	FAM218A	Q96MZ4	157 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF578	Q96N58	590 aa	Predicted RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	TSGA10	Q9BZW7	698 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	PRO3102	Q9H379	93 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	PEX16	Q9Y5Y5	336 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	BZW2	Q9Y6E2	419 aa	Known RBP	3.88	□□□□□ -1.79
ATM-223	ENST00000533979	TAF1L	Q8IZX4	1826 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ARFGEF1	Q9Y6D6	1849 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	PALLD	Q8WX93	1383 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	BAHCC1	Q9P281	2608 aa		3.88	□□□□□ -1.79
ATM-223	ENST00000533979	ZNF831	Q5JPB2	1677 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms