RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FKBP9P1Q75LS8 142 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 FCRLAQ7L513 359 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 LIX1LQ8IVB5 337 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 AQP12AQ8IXF9 295 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 OFCC1Q8IZS5 231 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 SLC43A2Q8N370 569 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 MFSD8Q8NHS3 518 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 CCDC124Q96CT7 223 aaKnown RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 KTI12Q96EK9 354 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 SLC41A3Q96GZ6 507 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 GMPPAQ96IJ6 420 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 RSRC1Q96IZ7 334 aaKnown RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 BCO1Q9HAY6 547 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 MAN2C1Q9NTJ4 1040 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 COQ3Q9NZJ6 369 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 NDUFAF4Q9P032 175 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 JKAMPQ9P055 326 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 RIMS3Q9UJD0 308 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 SLC7A7Q9UM01 511 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 ENPP4Q9Y6X5 453 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 A0A1W2PNV4 684 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 A1L4Q6 167 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 OR2T1O43869 369 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 GPIP06744 558 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 TMIGD3P0DMS9 266 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-206ENST00000531480 OPRM1P35372 400 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 IDUAP35475 653 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 RBM34P42696 430 aaKnown RBP12.91□□□□□ -0.34
CPSF1-206ENST00000531480 MAGEA2P43356 314 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 KIR2DL2P43627 348 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-206ENST00000531480 SLC16A1P53985 500 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 VLDLRP98155 873 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 FOXF2Q12947 444 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 FAM69AQ5T7M9 428 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 CCDC71Q8IV32 467 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-206ENST00000531480 TAAR8Q969N4 342 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 DHRS1Q96LJ7 313 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 ZNF300Q96RE9 604 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-206ENST00000531480 PSD2Q9BQI7 771 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 IL1RAPQ9NPH3 570 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 SELENONQ9NZV5 590 aa12.91□□□□□ -0.34
CPSF1-206ENST00000531480 ZNF716A6NP11 495 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 ZNF814B7Z6K7 855 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 AHSA1O95433 338 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 CLDN14O95500 239 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 CGAP01215 116 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 BGLAPP02818 100 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 RHCEP18577 417 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 KLK2P20151 261 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 FPR1P21462 350 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 FUT4P22083 530 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 TAS2R41P59536 307 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 TFF3Q07654 80 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 ST3GAL3Q11203 375 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 SLC25A35Q3KQZ1 300 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 FBXL19-AS1Q494R0 122 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 PIWIL3Q7Z3Z3 882 aaKnown RBP12.9□□□□□ -0.34
CPSF1-206ENST00000531480 P4HA3Q7Z4N8 544 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 SPATA24Q86W54 205 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 NKAIN4Q8IVV8 208 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 RELL2Q8NC24 303 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-206ENST00000531480 PIK3C3Q8NEB9 887 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 ROBO4Q8WZ75 1007 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 INTS12Q96CB8 462 aaKnown RBP12.9□□□□□ -0.34
CPSF1-206ENST00000531480 EPYCQ99645 322 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 ANKRD19PQ9H560 264 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 MAGIXQ9H6Y5 334 aa12.9□□□□□ -0.34
CPSF1-206ENST00000531480 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-206ENST00000531480 A0A1W2PRQ8 180 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 AQP7P3A6NL99 342 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 ZNF724A8MTY0 619 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 J3KTA2 159 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 DVL2O14641 736 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 MGRN1O60291 552 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 FCGR1AP12314 374 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 RPS5P46782 204 aaKnown RBP12.89□□□□□ -0.35
CPSF1-206ENST00000531480 PCYT1AP49585 367 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 LTBQ06643 244 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 DGCR6Q14129 220 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 MFSD13AQ14CX5 517 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 GCNT2Q8N0V5 402 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 ADPRHL1Q8NDY3 354 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 PIGXQ8TBF5 258 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 LIPHQ8WWY8 451 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 ZHX1-C8orf76Q96EF9 292 aa12.89□□□□□ -0.35
CPSF1-206ENST00000531480 HS6ST2Q96MM7 605 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms