RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 AKAP10O43572 662 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 UMPSP11172 480 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ZNF26P17031 533 aaPredicted RBP8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 TCN1P20061 433 aaPredicted RBP8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ATP6V1B2P21281 511 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 PRPH2P23942 346 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 SLC6A2P23975 617 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 GPC1P35052 558 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 EIF1P41567 113 aaKnown RBP8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 RPL5P46777 297 aaKnown RBP8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 CASP9P55211 416 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 NRF1Q16656 503 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 VPS26BQ4G0F5 336 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ATP6AP1LQ52LC2 224 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 KLHL26Q53HC5 615 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 GTF2IRD2BQ6EKJ0 949 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 SZRD1Q7Z422 152 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 GTF2IRD2Q86UP8 949 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 SLC15A3Q8IY34 581 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 DPP10Q8N608 796 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 COX18Q8N8Q8 333 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 FAM156AQ8NDB6 213 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ATP6V1C2Q8NEY4 427 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 CLHC1Q8NHS4 586 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 GPR119Q8TDV5 335 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 C10orf105Q8TEF2 133 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 SLCO4A1Q96BD0 722 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 LRRC58Q96CX6 371 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 FAM120BQ96EK7 910 aaKnown RBP8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 KCNK17Q96T54 332 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ANKRD60Q9BZ19 345 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 PCDHAC1Q9H158 963 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ALG2Q9H553 416 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 NGBQ9NPG2 151 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 GIN1Q9NXP7 522 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 ASIC5Q9NY37 505 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 CARD8Q9Y2G2 431 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 SNX13Q9Y5W8 968 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 SNX8Q9Y5X2 465 aa8.09□□□□□ -1.11
CHMP4A-205ENST00000531158 CCDC154A6NI56 674 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 OR5H1A6NKK0 313 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 VWC2LB2RUY7 222 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 H7C417 338 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 SCDO00767 359 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 ARPC2O15144 300 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 CYTIPO60759 359 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 TBX19O60806 448 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 SLC22A3O75751 556 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 RAD51DO75771 328 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 IGHV3-9P01782 118 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 HMGN2P05204 90 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 LINC00032P0C843 101 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 ZNF83P51522 516 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 P2RX1P51575 399 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 RAC3P60763 192 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 EMX2Q04743 252 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 MAD2L1Q13257 205 aaPredicted RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 DYNC1I2Q13409 638 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 NFYCQ13952 458 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 RFTN2Q52LD8 501 aaPredicted RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 SLC25A53Q5H9E4 307 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 TIMM23BQ5SRD1 257 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 PDSS1Q5T2R2 415 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 AGAP6Q5VW22 663 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 CLEC2AQ6UVW9 174 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 CARM1Q86X55 608 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 MISPQ8IVT2 679 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 MUC15Q8N387 334 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 PAPD5Q8NDF8 572 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 PHOSPHO1Q8TCT1 267 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 LRTOMTQ8WZ04 291 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 POP5Q969H6 163 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 REXO5Q96IC2 774 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 MRGPRX4Q96LA9 322 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 PPP3R2Q96LZ3 170 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 TSSK3Q96PN8 268 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 SOX7Q9BT81 388 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 BTBD2Q9BX70 525 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 BEX2Q9BXY8 128 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 REEP4Q9H6H4 257 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 VCX3AQ9NNX9 186 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 PAPOLBQ9NRJ5 636 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 CBLN4Q9NTU7 201 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 MAGEL2Q9UJ55 1249 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 KCNE5Q9UJ90 142 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 AP3M1Q9Y2T2 418 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 WBP11Q9Y2W2 641 aaKnown RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 SLC25A15Q9Y619 301 aa8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 GPC6Q9Y625 555 aaPredicted RBP8.08□□□□□ -1.12
CHMP4A-205ENST00000531158 ZNF716A6NP11 495 aa8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 ZNF724A8MTY0 619 aa8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 BCAS1O75363 584 aaPredicted RBP8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 SEC22BO75396 215 aa8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 CLPTM1O96005 669 aa8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 ALOX5P09917 674 aa8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 HOXB6P17509 224 aaKnown RBP8.07□□□□□ -1.12
CHMP4A-205ENST00000531158 GGT1P19440 569 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms