RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 ZNF225Q9UK10 706 aa3.44□□□□□ -1.86
CHEK1-211ENST00000531062 ZNF223Q9UK11 482 aaPredicted RBP3.44□□□□□ -1.86
CHEK1-211ENST00000531062 USP32Q8NFA0 1604 aa3.44□□□□□ -1.86
CHEK1-211ENST00000531062 NRXN1Q9ULB1 1477 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 SBNO1A3KN83 1393 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 TRBV6-6A0A0A6YYG2 114 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 A0A1W2PNV4 684 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 PSMB11A5LHX3 300 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 VSTM2BA6NLU5 285 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 DFNA5O60443 496 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 N4BP1O75113 896 aaKnown RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 PRB2P02812 416 aaPredicted RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 GIPP09681 153 aaPredicted RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 CTRLP40313 264 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 CSNK1DP48730 415 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 HTD2P86397 168 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 UNC119Q13432 240 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 MXD4Q14582 209 aaPredicted RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 CLDN19Q8N6F1 224 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 FADS6Q8N9I5 356 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 OR56B4Q8NH76 319 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 ST8SIA1Q92185 356 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 IL22RA2Q969J5 263 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 C4orf36Q96KX1 117 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 RIT2Q99578 217 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 THUMPD2Q9BTF0 503 aaKnown RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 TMEM117Q9H0C3 514 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 VCPKMTQ9H867 229 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 FARSBQ9NSD9 589 aaKnown RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 AATFQ9NY61 560 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 MTRF1LQ9UGC7 380 aaKnown RBP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 PHF11Q9UIL8 331 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 TRAF3IP3Q9Y228 551 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 FMN2Q9NZ56 1722 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 SLIT2O94813 1529 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 ANKARQ7Z5J8 1434 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 ATP10DQ9P241 1426 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 SF3B1O75533 1304 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHEK1-211ENST00000531062 KIF1AQ12756 1690 aa3.43□□□□□ -1.86
CHEK1-211ENST00000531062 COL22A1Q8NFW1 1626 aaPredicted RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 A0A0G2JRQ6 117 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RGSL1A5PLK6 1076 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 NPIPA7E9PJI5 369 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 B3GALNT1O75752 331 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 TM7SF2O76062 418 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 UFL1O94874 794 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 ALOX5P09917 674 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 NPIPA8P0DM63 369 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 EPB41P11171 864 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RPS10P46783 165 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 ACADVLP49748 655 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 DAP3P51398 398 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 HNRNPA3P51991 378 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 MAP2K1Q02750 393 aaPredicted RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 TATDN3Q17R31 274 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 GDPD3Q7L5L3 318 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 LRRC43Q8N309 656 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RAET1EQ8TD07 263 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 BLOC1S5Q8TDH9 187 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 SPRYD4Q8WW59 207 aaPredicted RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RPUSD4Q96CM3 377 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 STARD4Q96DR4 205 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RASL11BQ9BPW5 248 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 SLC35A5Q9BS91 424 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 POLR1EQ9GZS1 481 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RHBGQ9H310 441 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 COQ10BQ9H8M1 238 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 TBK1Q9UHD2 729 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 NUFIP1Q9UHK0 495 aaKnown RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 RAB26Q9ULW5 256 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 NPIPA1Q9UND3 350 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 OR10H1Q9Y4A9 318 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 V9GY05 133 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 TULP4Q9NRJ4 1543 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 PPIP5K1Q6PFW1 1433 aa3.42□□□□□ -1.86
CHEK1-211ENST00000531062 CENPJQ9HC77 1338 aaPredicted RBP3.42□□□□□ -1.86
CHEK1-211ENST00000531062 IFT172Q9UG01 1749 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 PLCH1Q4KWH8 1693 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 PPIAL4DF5H284 164 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 RS1O15537 224 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 ZSCAN12O43309 604 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 TRAF3IP2O43734 574 aaPredicted RBP3.41□□□□□ -1.86
CHEK1-211ENST00000531062 OR10H3O60404 316 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 MMP1P03956 469 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 POLR2EP19388 210 aaKnown RBP3.41□□□□□ -1.86
CHEK1-211ENST00000531062 HTR1FP30939 366 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 SH3BGRP55822 239 aaPredicted RBP3.41□□□□□ -1.86
CHEK1-211ENST00000531062 TGFBR3Q03167 851 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 NCR3LG1Q68D85 454 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 ZNF571Q7Z3V5 609 aaPredicted RBP3.41□□□□□ -1.86
CHEK1-211ENST00000531062 ZNF786Q8N393 782 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 PNKDQ8N490 385 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 SH3YL1Q96HL8 342 aaPredicted RBP3.41□□□□□ -1.86
CHEK1-211ENST00000531062 KCNA7Q96RP8 456 aa3.41□□□□□ -1.86
CHEK1-211ENST00000531062 TSG101Q99816 390 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms