RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SYNDIG1LA6NDD5 238 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 SDR42E2A6NKP2 422 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 GOLGA8MH3BSY2 632 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 NME2P1O60361 137 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 GALR3O60755 368 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-213ENST00000530784 FHP07954 510 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 HIST1H2AGP0C0S8 130 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-213ENST00000530784 EFNA1P20827 205 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-213ENST00000530784 CYB561P49447 251 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 RGS4P49798 205 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 CCR8P51685 355 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 BMXP51813 675 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 DEFB134Q4QY38 66 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 UGT3A1Q6NUS8 523 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 NIPAL1Q6NVV3 410 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 C3P1Q6ZMU1 363 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 MBOAT1Q6ZNC8 495 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 RPS19BP1Q86WX3 136 aaKnown RBP5.92□□□□□ -1.46
CSDE1-213ENST00000530784 LINC00346Q8IVM7 164 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 TBC1D19Q8N5T2 526 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 ZNF611Q8N823 705 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 MFSD9Q8NBP5 474 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 SPC24Q8NBT2 197 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 ZNF740Q8NDX6 193 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 PLPP5Q8NEB5 264 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 OR5T3Q8NGG3 340 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 OR5M8Q8NGP6 311 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 FGFBP3Q8TAT2 258 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 MRGPRDQ8TDS7 321 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 CA5BP1Q8WTZ4 195 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 EEF1AKMT1Q8WVE0 214 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 TMCO6Q96DC7 493 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 C14orf79Q96F83 325 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 SERPINB12Q96P63 405 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 NDNQ99608 321 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 OLFM1Q99784 485 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 OPRPNQ99935 248 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-213ENST00000530784 TRIM51Q9BSJ1 452 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 FNDC11Q9BVV2 318 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 LAT2Q9GZY6 243 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 ATG10Q9H0Y0 220 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 PARVBQ9HBI1 364 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 LZTFL1Q9NQ48 299 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 FBXO5Q9UKT4 447 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 PDE10AQ9Y233 779 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 MAD1L1Q9Y6D9 718 aa5.92□□□□□ -1.46
CSDE1-213ENST00000530784 SNRNP200O75643 2136 aaKnown RBP5.92□□□□□ -1.46
CSDE1-213ENST00000530784 CREBBPQ92793 2442 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 POLEQ07864 2286 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 IGHV4-4A0A075B6R2 117 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 A0A087WW49 117 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TRBC2A0A5B9 178 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 SAGE2PA6NJ88 616 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TFECO14948 347 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 ARHGEF9O43307 516 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 CHST10O43529 356 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 OR1F1O43749 312 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 LCMT2O60294 686 aaKnown RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 B4GALT2O60909 372 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 PRKRAO75569 313 aaKnown RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 ERAL1O75616 437 aaKnown RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 KRT14P02533 472 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 RAF1P04049 648 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 SERPIND1P05546 499 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 CCDC175P0C221 793 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 B3GALT5-AS1P59052 145 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TLE4Q04727 773 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 RGS1Q08116 209 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 PHKG1Q16816 387 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 HSP90AA5PQ58FG0 334 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 GPR139Q6DWJ6 353 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TTC27Q6P3X3 843 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 ABHD13Q7L211 337 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 DOLPP1Q86YN1 238 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 KIF2BQ8N4N8 673 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 MAPKAPK5-AS1Q8N8E1 139 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 POGLUT1Q8NBL1 392 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TSPAN14Q8NG11 270 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 OR2T6Q8NHC8 308 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 FAM57AQ8TBR7 257 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 PYCR2Q96C36 320 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 POM121L2Q96KW2 1035 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 LINC00479Q96M42 142 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TRIM45Q9H8W5 580 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 SLC35C2Q9NQQ7 365 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 IARS2Q9NSE4 1012 aaKnown RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 ZDHHC18Q9NUE0 388 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 TAS2R13Q9NYV9 303 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 KLF13Q9Y2Y9 288 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-213ENST00000530784 GRIP1Q9Y3R0 1128 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 CCDC88CQ9P219 2028 aa5.91□□□□□ -1.46
CSDE1-213ENST00000530784 APCP25054 2843 aa5.9□□□□□ -1.46
CSDE1-213ENST00000530784 CSMD1Q96PZ7 3565 aa5.9□□□□□ -1.46
CSDE1-213ENST00000530784 A0A1W2PN81 502 aa5.9□□□□□ -1.46
CSDE1-213ENST00000530784 URADA6NGE7 173 aa5.9□□□□□ -1.46
CSDE1-213ENST00000530784 SLCO1B7G3V0H7 640 aa5.9□□□□□ -1.46
CSDE1-213ENST00000530784 KLRC4-KLRK1H3BQV0 150 aa5.9□□□□□ -1.46
CSDE1-213ENST00000530784 PSMD12O00232 456 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-213ENST00000530784 CDC40O60508 579 aaKnown RBP eCLIP5.9□□□□□ -1.46
CSDE1-213ENST00000530784 PGAM1P18669 254 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms