RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, human

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-208	ENST00000530008	CXCL17	Q6UXB2	119 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SKA3	Q8IX90	412 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	KATNAL2	Q8IYT4	538 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR4K14	Q8NGD5	310 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ACMSD	Q8TDX5	336 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ZNF578	Q96N58	590 aa	Predicted RBP	4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	GAL3ST1	Q99999	423 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	NUP50	Q9UKX7	468 aa		4.92	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	IGHV3-35	A0A0C4DH35	117 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SPECC1L-ADORA2A	F8WAN1	911 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CLOCK	O15516	846 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RBMY1C	P0DJD4	496 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	IFNA8	P32881	189 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	VHL	P40337	213 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ARL6IP1	Q15041	203 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	NSUN5P1	Q3KNT7	163 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PAN3	Q58A45	887 aa	Known RBP	4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SAMD4B	Q5PRF9	694 aa	Known RBP	4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	TMEM220	Q6QAJ8	160 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SASS6	Q6UVJ0	657 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	DNM1P46	Q6ZS02	220 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	NIPA1	Q7RTP0	329 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CADM2	Q8N3J6	435 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	B3GNT7	Q8NFL0	401 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PLPPR1	Q8TBJ4	325 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	FGF11	Q92914	225 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PGLYRP4	Q96LB8	373 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	APOL2	Q9BQE5	337 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	BCL7B	Q9BQE9	202 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RIOK1	Q9BRS2	568 aa	Known RBP	4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	IQCG	Q9H095	443 aa	Known RBP	4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PLEKHG2	Q9H7P9	1386 aa		4.91	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008		A0A1B0GTQ1	180 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	SUPT3H	B4E1H0	165 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	OR2J3	O76001	311 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	OR2F2	O95006	317 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	TBX6	O95947	436 aa	Predicted RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	LGI1	O95970	557 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	UBTFL1	P0CB47	393 aa	Predicted RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	FOLR2	P14207	255 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	ZNF24	P17028	368 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	MAGEA1	P43355	309 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	OR1G1	P47890	313 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	RAB9A	P51151	201 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	SLC25A1	P53007	311 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	ZFP36L1	Q07352	338 aa	Known RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	SPAG1	Q07617	926 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	MRPL23	Q16540	153 aa	Known RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	AANAT	Q16613	207 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	SLC25A48	Q6ZT89	311 aa	Known RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	GDPD3	Q7L5L3	318 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	SCD5	Q86SK9	330 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	VRK2	Q86Y07	508 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	MFSD6L	Q8IWD5	586 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	POM121L12	Q8N7R1	296 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	GPR151	Q8TDV0	419 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	PAGE5	Q96GU1	130 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	MRPL45	Q9BRJ2	306 aa	Known RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	RSPH14	Q9UHP6	348 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	UBQLN1	Q9UMX0	589 aa	Known RBP	4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	N6AMT1	Q9Y5N5	214 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	PRSS21	Q9Y6M0	314 aa		4.9	□□□□□ -1.63
CAPRIN1-208	ENST00000530008		A0A1B0GU03	582 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	KRTAP16-1	A8MUX0	517 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	MBTPS2	O43462	519 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	ABO	P16442	354 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	HOXB6	P17509	224 aa	Known RBP	4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	TNNT2	P45379	298 aa	Predicted RBP	4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	GSS	P48637	474 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	TIMM50	Q3ZCQ8	353 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	CEP85L	Q5SZL2	805 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	TMEM53	Q6P2H8	277 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	MARCH9	Q86YJ5	346 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	FTMT	Q8N4E7	242 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	OR52K1	Q8NGK4	314 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	AGAP11	Q8TF27	550 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	NRGN	Q92686	78 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	KIFAP3	Q92845	792 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	FANCE	Q9HB96	536 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	FOLH1B	Q9HBA9	442 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	PDP1	Q9P0J1	537 aa	Predicted RBP	4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	SH3TC1	Q8TE82	1336 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	INSR	P06213	1382 aa		4.89	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	IGKV1D-8	A0A087WSZ0	117 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	LOC110117498-PIK3R3	F6TDL0	507 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	OR8U8	P0C7N1	319 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	GATA1	P15976	413 aa	Predicted RBP	4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	PRDX3	P30048	256 aa	Known RBP	4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	YAP1	P46937	504 aa	Known RBP	4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	DOC2A	Q14183	400 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	PRR4	Q16378	134 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	LRRC36	Q1X8D7	754 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	OR2B11	Q5JQS5	317 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	KLF17	Q5JT82	389 aa	Predicted RBP	4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	PIP5KL1	Q5T9C9	394 aa		4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	ZNF772	Q68DY9	489 aa	Predicted RBP	4.88	□□□□□ -1.63
CAPRIN1-208	ENST00000530008	FRA10AC1	Q70Z53	315 aa		4.88	□□□□□ -1.63

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