RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SLC22A10Q63ZE4 541 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SULT1C3Q6IMI6 304 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PQLC2Q6ZP29 291 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CAMKMTQ7Z624 323 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 LRRC8AQ8IWT6 810 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ACOT4Q8N9L9 421 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 KIF18AQ8NI77 898 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 NEIL3Q8TAT5 605 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PAQR8Q8TEZ7 354 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF721Q8TF20 911 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ANKRD49Q8WVL7 239 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SLCO2A1Q92959 643 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 RNASE6Q93091 150 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 FAM162AQ96A26 154 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PHF21BQ96EK2 531 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 WDR34Q96EX3 536 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 RBM18Q96H35 190 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SENP5Q96HI0 755 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CAPZA3Q96KX2 299 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 HARBI1Q96MB7 349 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 F2RL3Q96RI0 385 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 KRT12Q99456 494 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 MAPKAP1Q9BPZ7 522 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PELOQ9BRX2 385 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CENPKQ9BS16 269 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DERL2Q9GZP9 239 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 RHOJQ9H4E5 214 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DENND2DQ9H6A0 471 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ACKR4Q9NPB9 350 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 MS4A12Q9NXJ0 267 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CNIH4Q9P003 139 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SPRR3Q9UBC9 169 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TEX264Q9Y6I9 313 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 C15orf38-AP3S2A0A0A6YYH1 394 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 IQANK1A0A1B0GTG1 560 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TP53I11O14683 189 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 WNT9BO14905 357 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TAPBPO15533 448 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 FGF17O60258 216 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 OR10H2O60403 315 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF354AO60765 605 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 SCELO95171 688 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 GOSR1O95249 250 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ETHE1O95571 254 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TBX6O95947 436 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 RAF1P04049 648 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 CCDC166P0CW27 439 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 MMP9P14780 707 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PTAFRP25105 342 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ATP5A1P25705 553 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TLX1P31314 330 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 RPL21P46778 160 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TRPC1P48995 793 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 RAP1GDS1P52306 607 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 KRTAP10-11P60412 298 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ATP6V0D1P61421 351 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 IGLV3-21P80748 117 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 HNRNPA0Q13151 305 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 CHIT1Q13231 466 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 SLAMF1Q13291 335 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 FBXL19-AS1Q494R0 122 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ACSF3Q4G176 576 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PRAMEF20Q5VT98 475 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TMEM198Q66K66 360 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ADNP2Q6IQ32 1131 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 MED27Q6P2C8 311 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PAMR1Q6UXH9 720 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 LRRC70Q7Z2Q7 622 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 CDC20BQ86Y33 519 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 LACC1Q8IV20 430 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 C9orf40Q8IXQ3 194 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PM20D2Q8IYS1 436 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 SLC35F6Q8N357 371 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 LRRC25Q8N386 305 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 C9orf106Q8NAJ2 232 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 RELL2Q8NC24 303 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 BBOF1Q8ND07 529 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 FBXO36Q8NEA4 188 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 OR2AK2Q8NG84 335 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 OR10G3Q8NGC4 313 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 SETD6Q8TBK2 473 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 FAM216AQ8WUB2 273 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 CDKL2Q92772 493 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 TANKQ92844 425 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ANKRD9Q96BM1 317 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 CMTM7Q96FZ5 175 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 MED30Q96HR3 178 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF597Q96LX8 424 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 C3orf30Q96M34 536 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 JSRP1Q96MG2 331 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 GAL3ST4Q96RP7 486 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 PCGF1Q9BSM1 259 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 NAA11Q9BSU3 229 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 DOHHQ9BU89 302 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 THUMPD3Q9BV44 507 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 MS4A8Q9BY19 250 aa4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 DDX47Q9H0S4 455 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-209ENST00000529963 LIME1Q9H400 295 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms