RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 OR11A1Q9GZK7 315 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 C1orf21Q9H246 121 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 RAD21L1Q9H4I0 556 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 CISD1Q9NZ45 108 aaKnown RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 CAPN7Q9Y6W3 813 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 RAI1Q7Z5J4 1906 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 DSCAMO60469 2012 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 A0A096LPI6 279 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 TMEM72A0PK05 275 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 FAM234BA2RU67 622 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 TRIM64A6NGJ6 449 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 TRIM64BA6NI03 449 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 C1QCP02747 245 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 GPIP06744 558 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 SOD3P08294 240 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 IMPDH2P12268 514 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 CCNA2P20248 432 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 PAX7P23759 505 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 EDNRAP25101 427 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 DSTNP60981 165 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 MAPK11Q15759 364 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 HMGN2P46Q86SG4 172 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 CCDC103Q8IW40 242 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 C17orf78Q8N4C9 275 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 C1orf162Q8NEQ5 155 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-212ENST00000527887 RP9Q8TA86 221 aaKnown RBP12.51□□□□□ -0.41
CAPN1-212ENST00000527887 SLC38A5Q8WUX1 472 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 TMEM45BQ96B21 275 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 ALG2Q9H553 416 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 BARX1Q9HBU1 254 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-212ENST00000527887 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 FLVCR1Q9Y5Y0 555 aa12.51□□□□□ -0.41
CAPN1-212ENST00000527887 HEATR5AQ86XA9 2040 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 A8MVM7 634 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 PDLIM1O00151 329 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 SMAD7O15105 426 aaKnown RBP12.5□□□□□ -0.41
CAPN1-212ENST00000527887 DNAJC8O75937 253 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-212ENST00000527887 VAMP5O95183 116 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 ETFAP13804 333 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
CAPN1-212ENST00000527887 FAPQ12884 760 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 KLF10Q13118 480 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 FADDQ13158 208 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 SQLEQ14534 574 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 MAPRE2Q15555 327 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 GABRA6Q16445 453 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 AGAP6Q5VW22 663 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 CASP12Q6UXS9 341 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-212ENST00000527887 ASRGL1Q7L266 308 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 ABHD12BQ7Z5M8 362 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-212ENST00000527887 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 BOD1Q96IK1 185 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 SPATA9Q9BWV2 254 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 AMBRA1Q9C0C7 1298 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 BCL2L10Q9HD36 194 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 RLIMQ9NVW2 624 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 MAGED1Q9Y5V3 778 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-212ENST00000527887 SLC25A15Q9Y619 301 aa12.5□□□□□ -0.41
CAPN1-212ENST00000527887 HIVEP2P31629 2446 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 OR6C65A6NJZ3 312 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 LIPT2A6NK58 231 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ABCD4O14678 606 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 RAD51DO75771 328 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 BCHEP06276 602 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 BMP2P12643 396 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 NTF4P34130 210 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 STX1BP61266 288 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 CLEC12BQ2HXU8 276 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 C6orf10Q5SRN2 563 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ZNF836Q6ZNA1 936 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
CAPN1-212ENST00000527887 VRK2Q86Y07 508 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 POMGNT2Q8NAT1 580 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 KBTBD8Q8NFY9 601 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 STK35Q8TDR2 534 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 GTF2H4Q92759 462 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 TMEM19Q96HH6 336 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 TRAF4Q9BUZ4 470 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-212ENST00000527887 TAPBPLQ9BX59 468 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 LRMDAQ9H2I8 198 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 MMADHCQ9H3L0 296 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-212ENST00000527887 SLC6A13Q9NSD5 602 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ARL8BQ9NVJ2 186 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 NPAP1Q9NZP6 1156 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ARMCX1Q9P291 453 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ZNF443Q9Y2A4 671 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-212ENST00000527887 AMDHD2Q9Y303 409 aa12.49□□□□□ -0.41
CAPN1-212ENST00000527887 ZC3H12DA2A288 527 aaKnown RBP12.48□□□□□ -0.41
CAPN1-212ENST00000527887 AQP7P3A6NL99 342 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 CLIC1O00299 241 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 RAMP1O60894 148 aa12.48□□□□□ -0.41
CAPN1-212ENST00000527887 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms