RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 KRT34O76011 436 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 AHSA1O95433 338 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 PNMTP11086 282 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 COX5AP20674 150 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 IGHV1-2P23083 117 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 INTS11Q5TA45 600 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 FAM91A1Q658Y4 838 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 ULK3Q6PHR2 472 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 PATL1Q86TB9 770 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 UBE2J2Q8N2K1 259 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 SMYD1Q8NB12 490 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 PCYOX1LQ8NBM8 494 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 MFSD8Q8NHS3 518 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 HS3ST6Q96QI5 342 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 TMEM27Q9HBJ8 222 aa23.3■■□□□ 1.32
TSPAN4-217ENST00000527644 FXYD1O00168 92 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 LYZL6O75951 148 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 VAMP5O95183 116 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 C8BP07358 591 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 EGR4Q05215 589 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 TAB1Q15750 504 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 VMACQ2NL98 169 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 ALG10BQ5I7T1 473 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 TMEM225Q6GV28 225 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 C5orf46Q6UWT4 87 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 RANBP3LQ86VV4 465 aaPredicted RBP23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 SLC47A1Q96FL8 570 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 ECSITQ9BQ95 431 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 PRR14Q9BWN1 585 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 GID8Q9NWU2 228 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 SELENONQ9NZV5 590 aa23.29■■□□□ 1.32
TSPAN4-217ENST00000527644 CELSR1Q9NYQ6 3014 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 F8P00451 2351 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 LGI1O95970 557 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 IGHV3-9P01782 118 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 OR1Q1Q15612 314 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 DUSP7Q16829 419 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 RABL3Q5HYI8 236 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 CASP12Q6UXS9 341 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 OR9K2Q8NGE7 335 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 SLC38A4Q969I6 547 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 TMEM45BQ96B21 275 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 PLPPR2Q96GM1 343 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 ALPK1Q96QP1 1244 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 PTDSS2Q9BVG9 487 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 NGBQ9NPG2 151 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 ASB6Q9NWX5 421 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 HIVEP1P15822 2718 aa23.28■■□□□ 1.32
TSPAN4-217ENST00000527644 PRR14LQ5THK1 2151 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 FTCDNL1E5RQL4 147 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 OR2T1O43869 369 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 TPST2O60704 377 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 OPN1SWP03999 348 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 CD53P19397 219 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 RPS5P46782 204 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 P2RY4P51582 365 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 ALKBH2Q6NS38 261 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 SSX8Q7RTT4 187 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 GPAT4Q86UL3 456 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 P2RY8Q86VZ1 359 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 CALHM3Q86XJ0 350 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 ZNF433Q8N7K0 673 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 KTI12Q96EK9 354 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 ARHGDIGQ99819 225 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 WFDC6Q9BQY6 131 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 ARMCX1Q9P291 453 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 MALT1Q9UDY8 824 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 RASD1Q9Y272 281 aa23.27■■□□□ 1.32
TSPAN4-217ENST00000527644 A0A0B4J2E0 115 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 A0A1B0GX12 115 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 FMO6PO60774 539 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 CCDC22O60826 627 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 GGT1P19440 569 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 ACKR1Q16570 336 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 NRF1Q16656 503 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 DEFB113Q30KQ7 82 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 CCDC80Q76M96 950 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 ZIC4Q8N9L1 334 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 GPR32P1Q8NGA4 272 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 RP9Q8TA86 221 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 SLC26A7Q8TE54 656 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 RASSF5Q8WWW0 418 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 SLC25A36Q96CQ1 311 aa23.26■■□□□ 1.31
TSPAN4-217ENST00000527644 TEP1Q99973 2627 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 A0A087WUJ7 227 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 FZD7O75084 574 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 GTF2E2P29084 291 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 FAPQ12884 760 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 STK11Q15831 433 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 TIMM23BQ5SRD1 257 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 SWT1Q5T5J6 900 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 FAM69AQ5T7M9 428 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 RNF217Q8TC41 542 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 MUCL1Q96DR8 90 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 MCHR1Q99705 422 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 TMEM204Q9BSN7 226 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 UBTD1Q9HAC8 227 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 TAS2R16Q9NYV7 291 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 UPB1Q9UBR1 384 aa23.25■■□□□ 1.31
TSPAN4-217ENST00000527644 ITPR3Q14573 2671 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms