RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ALDOCP09972 364 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TSPAN19P0C672 248 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PF4V1P10720 104 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PEPDP12955 493 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 NQO2P16083 231 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF14P17017 642 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 HLA-GP17693 338 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PTNP21246 168 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 AGXTP21549 392 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 C21orf33P30042 268 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SSTR1P30872 391 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SSTR2P30874 369 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MC5RP33032 325 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MAS1LP35410 378 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GGT2P36268 569 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TGFBR1P36897 503 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 IFNGR2P38484 337 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PBX3P40426 434 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MATKP42679 507 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PPT1P50897 306 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ARSEP51690 589 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 LUMP51884 338 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ACLYP53396 1101 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 EMP2P54851 167 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM33P57088 247 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CDC42P60953 191 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MRPS10P82664 201 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CDK6Q00534 326 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FOXM1Q08050 763 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 KEAP1Q14145 624 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PCLAFQ15004 111 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SMAD1Q15797 465 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ADIPOQQ15848 244 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 IL17AQ16552 155 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GUK1Q16774 197 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ATP6V1FQ16864 119 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 C5orf64Q2M2E5 130 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 EXOC3L2Q2M3D2 409 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 BSXQ3C1V8 233 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 KRTAP27-1Q3LI81 207 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SCGB2B2Q4G0G5 96 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PLA1AQ53H76 456 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SIRPB2Q5JXA9 342 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PIP5KL1Q5T9C9 394 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PRAMEF8Q5VWM4 474 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PRAMEF7Q5VXH5 474 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TRIQKQ629K1 86 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM71Q6P5X7 295 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TBPL2Q6SJ96 375 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 LCLAT1Q6UWP7 414 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CES3Q6UWW8 571 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM131AQ6UXB0 335 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MOB3CQ70IA8 216 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 AHSA2Q719I0 299 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SSX7Q7RTT5 188 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SSX6Q7RTT6 188 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GRINAQ7Z429 371 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PXKQ7Z7A4 578 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 BIVMQ86UB2 503 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CYP4Z1Q86W10 505 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 UNC93AQ86WB7 457 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 IFNEQ86WN2 208 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PTOV1Q86YD1 416 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF573Q86YE8 665 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 WDFY1Q8IWB7 410 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 RIMKLAQ8IXN7 391 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 KATNAL2Q8IYT4 538 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF679Q8IYX0 411 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SELENOHQ8IZQ5 122 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MMP21Q8N119 569 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FTMTQ8N4E7 242 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ACBD7Q8N6N7 88 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 LRRC52Q8N7C0 313 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 RBMXL3Q8N7X1 1067 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 C4orf32Q8N8J7 132 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 OR4F6Q8NGB9 312 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 OR51A7Q8NH64 312 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 NUBPLQ8TB37 319 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MITD1Q8WV92 249 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 HAS2Q92819 552 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CDS1Q92903 461 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF707Q96C28 371 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PYCR2Q96C36 320 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CMBLQ96DG6 245 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXO17Q96EF6 278 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 P2RY11Q96G91 374 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CDKN2AIPNLQ96HQ2 116 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 AMDHD1Q96NU7 426 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF382Q96SR6 550 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CGRRF1Q99675 332 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 HOPXQ9BPY8 73 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SOSTQ9BQB4 213 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 VKORC1Q9BQB6 163 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GINS4Q9BRT9 223 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ATG101Q9BSB4 218 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 FUZQ9BT04 418 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 URM1Q9BTM9 101 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM43Q9BTV4 400 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms