RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MBD6Q96DN6 1003 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 KTI12Q96EK9 354 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZNF385AQ96PM9 386 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 CCDC134Q9H6E4 229 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 NANOGQ9H9S0 305 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 ABCA4P78363 2273 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRRC2AP48634 2157 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 A0A1W2PR80 420 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 CIB4A0PJX0 185 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 AQP7P3A6NL99 342 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 M0R3H8 397 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 TPST2O60704 377 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 NPIPB7O75200 414 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 GGT1P19440 569 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 COX5AP20674 150 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 GZMMP51124 257 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 PCBP3P57721 371 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 NCALDP61601 193 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 RBBP4Q09028 425 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR1Q1Q15612 314 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 DUSP7Q16829 419 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 ALG10BQ5I7T1 473 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 TSPO2Q5TGU0 170 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF704Q6ZNC4 412 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 AAED1Q7RTV5 226 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 NET1Q7Z628 596 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 LSMEM1Q8N8F7 131 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 LRRC58Q96CX6 371 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 ALPK1Q96QP1 1244 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 PTDSS2Q9BVG9 487 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 TRIM2Q9C040 744 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 TMEM27Q9HBJ8 222 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC7A10Q9NS82 523 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 ASB6Q9NWX5 421 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 ARMCX1Q9P291 453 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 KLHL14Q9P2G3 628 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 UPB1Q9UBR1 384 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 SEC14L4Q9UDX3 406 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 USP22Q9UPT9 525 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC9A8Q9Y2E8 581 aa11.33□□□□□ -0.6
TRAPPC4-205ENST00000525079 IGKV1D-42A0A075B6H8 117 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 FTCDNL1E5RQL4 147 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 FXYD1O00168 92 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 CLOCKO15516 846 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 CNOT4O95628 575 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 LGI1O95970 557 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 PCGF2P35227 344 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 P2RY4P51582 365 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 NR1H2P55055 460 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 PPA1Q15181 289 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 MAPRE2Q15555 327 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 NCMAPQ5T1S8 102 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 ULK3Q6PHR2 472 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 C6orf89Q6UWU4 347 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 SEZ6L2Q6UXD5 910 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 RBM45Q8IUH3 476 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 BHLHE22Q8NFJ8 381 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR52N5Q8NH56 324 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 MFSD8Q8NHS3 518 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 VANGL1Q8TAA9 524 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 C10orf82Q8WW14 230 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 AKAP1Q92667 903 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 NEUROG1Q92886 237 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC47A1Q96FL8 570 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF317Q96PQ6 595 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 MCHR1Q99705 422 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 CCL19Q99731 98 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 BEX4Q9NWD9 120 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 PARPBPQ9NWS1 579 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 TESQ9UGI8 421 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 PRR14LQ5THK1 2151 aa11.32□□□□□ -0.6
TRAPPC4-205ENST00000525079 DPRXA6NFQ7 191 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 CD3EP07766 207 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 ITGA5P08648 1049 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 PNMTP11086 282 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 GTF2E2P29084 291 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 CDH12P55289 794 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 ADAM8P78325 824 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 BSPH1Q075Z2 132 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 NPTX1Q15818 432 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 GABRA6Q16445 453 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 VMACQ2NL98 169 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 TIMM23BQ5SRD1 257 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 CREB3L2Q70SY1 520 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 PATL1Q86TB9 770 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 RANBP3LQ86VV4 465 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR4D11Q8NGI4 311 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR6T1Q8NGN1 323 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC26A7Q8TE54 656 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms