RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 DEPDC4Q8N2C3 294 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 CLIP4Q8N3C7 705 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 ZNF525Q8N782 197 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 SLC38A5Q8WUX1 472 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 AURKBQ96GD4 344 aaPredicted RBP16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 MAELQ96JY0 434 aaKnown RBP16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 SF3B5Q9BWJ5 86 aaKnown RBP16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 P2RX2Q9UBL9 471 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 AMDHD2Q9Y303 409 aa16.44■□□□□ 0.22
PTP4A3-206ENST00000524028 TMEM120BA0PK00 339 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 H7C417 338 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 SLC22A3O75751 556 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 BCHEP06276 602 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 CRATP43155 626 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 LGALS3BPQ08380 585 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 HIKESHIQ53FT3 197 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 NXNQ6DKJ4 435 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 WBP2NLQ6ICG8 309 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 CADM2Q8N3J6 435 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 SPATA3Q8NHX4 192 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 VPS33AQ96AX1 596 aa16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 ZNF443Q9Y2A4 671 aaPredicted RBP16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 CHD3Q12873 2000 aaKnown RBP16.43■□□□□ 0.22
PTP4A3-206ENST00000524028 ELOA3DA6NLF2 546 aaPredicted RBP16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 ATP6V1G2-DDX39BF2Z307 99 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 ZCCHC18P0CG32 403 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 IDO1P14902 403 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 CDH2P19022 906 aaPredicted RBP16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 DSCR9P59020 149 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 PRPS1P60891 318 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 DSTNP60981 165 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 TGFBR3Q03167 851 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 ELOA3BQ3SY89 546 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 RNF220Q5VTB9 566 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 HMBOX1Q6NT76 420 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 CLEC2AQ6UVW9 174 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 GPAT4Q86UL3 456 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 ELOA3Q8NG57 546 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 NANOS1Q8WY41 292 aaKnown RBP16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 BOD1Q96IK1 185 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 TPT1P8Q9HAU6 139 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 ADPRHL2Q9NX46 363 aa16.42■□□□□ 0.22
PTP4A3-206ENST00000524028 MXRA5Q9NR99 2828 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 CUBNO60494 3623 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 A8MV72 311 aaPredicted RBP16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 A8MVM7 634 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 KLF11O14901 512 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 NPIPB7O75200 414 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 LY6HO94772 140 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 APOBEC3AP31941 199 aaPredicted RBP16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 CRISP3P54108 245 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 LOXL1Q08397 574 aaPredicted RBP16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 MST1LQ2TV78 715 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 TMEM249Q2WGJ8 235 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 C6orf52Q5T4I8 152 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 TMEM225Q6GV28 225 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 CREB3L2Q70SY1 520 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 LINGO2Q7L985 606 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 SERPINA11Q86U17 422 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 POMGNT2Q8NAT1 580 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 OR9I1Q8NGQ6 314 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 C3orf49Q96BT1 292 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 TMEM19Q96HH6 336 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 OR52B2Q96RD2 323 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 TNFRSF13CQ96RJ3 184 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 PIF1Q9H611 641 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 MANSC1Q9H8J5 431 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 FKRPQ9H9S5 495 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 SDR39U1Q9NRG7 319 aaPredicted RBP16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 CALML5Q9NZT1 146 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 MOKQ9UQ07 419 aa16.41■□□□□ 0.22
PTP4A3-206ENST00000524028 SLCO1B7G3V0H7 640 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 FRS3O43559 492 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 ANP32DO95626 131 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 NUDT7P0C024 238 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 SELENOPP49908 381 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 COPZ1P61923 177 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 HOXC5Q00444 222 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 C1orf140Q5VVS0 124 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 CROCCP2Q86T23 111 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 EPHX4Q8IUS5 362 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 C10orf105Q8TEF2 133 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 ITCHQ96J02 903 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 SPATA9Q9BWV2 254 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 TAPBPLQ9BX59 468 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 RSPO3Q9BXY4 272 aaPredicted RBP16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 ZIM2Q9NZV7 527 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 PRDM4Q9UKN5 801 aa16.4■□□□□ 0.22
PTP4A3-206ENST00000524028 STAB1Q9NY15 2570 aa16.39■□□□□ 0.22
PTP4A3-206ENST00000524028 IGHV1-18A0A0C4DH31 117 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 A0A0G2JPF8 293 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 TMEM229AB2RXF0 380 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 HNRNPCL2B2RXH8 293 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 HNRNPCL3B7ZW38 293 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 HNRNPCL1O60812 293 aaKnown RBP16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 LGI1O95970 557 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 WNT11O96014 354 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 HNRNPCL4P0DMR1 293 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms