RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TPD52L3Q96J77 140 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 ZNF300Q96RE9 604 aaPredicted RBP11.14□□□□□ -0.63
CCNC-216ENST00000523961 EPYCQ99645 322 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 C12orf49Q9H741 205 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 ADGRG4Q8IZF6 3080 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 TRAV36DV7A0A075B6V5 113 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 AQP7P3A6NL99 342 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 ZNF716A6NP11 495 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 GMNNO75496 209 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 AKR7A3O95154 331 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 GGT1P19440 569 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 GTF2E2P29084 291 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 RPS5P46782 204 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 SLC25A3Q00325 362 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 SNTB1Q13884 538 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 MFSD13AQ14CX5 517 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 EXOC3L2Q2M3D2 409 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 SAMD4BQ5PRF9 694 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 FAM69AQ5T7M9 428 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 TFAP2EQ6VUC0 442 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 ZNF295-AS1Q8N0V1 137 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 TMEM99Q8N816 258 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 FAM222BQ8WU58 562 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 FAM162AQ96A26 154 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 KTI12Q96EK9 354 aaPredicted RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 MPP4Q96JB8 637 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 TMEM43Q9BTV4 400 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 PTDSS2Q9BVG9 487 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 SF3B5Q9BWJ5 86 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 POLR2J2Q9GZM3 115 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 POLR2J3Q9H1A7 115 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 NDRG3Q9UGV2 375 aa11.13□□□□□ -0.63
CCNC-216ENST00000523961 NOSIPQ9Y314 301 aaKnown RBP11.13□□□□□ -0.63
CCNC-216ENST00000523961 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
CCNC-216ENST00000523961 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 B2RBV5 119 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 FTCDNL1E5RQL4 147 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 C16orf97H3BN30 126 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 RAMP1O60894 148 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 FZD7O75084 574 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 VAMP5O95183 116 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 ZNF682O95780 498 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 HSD17B1P14061 328 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 TNFRSF1BP20333 461 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 CALB2P22676 271 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 UGT2B10P36537 528 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 OR1E2P47887 323 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 OR3A2P47893 321 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 TAS2R41P59536 307 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 SPATS1Q496A3 300 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 TMEM225Q6GV28 225 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 GLYATQ6IB77 296 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 LINC00114Q6XXX2 140 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 DEF8Q6ZN54 512 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 CBLL1Q75N03 491 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 LSRQ86X29 649 aaPredicted RBP11.12□□□□□ -0.63
CCNC-216ENST00000523961 ZNF100Q8IYN0 542 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 DEFB107AQ8IZN7 70 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 RNF148Q8N7C7 305 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 TAAR8Q969N4 342 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 ZNF775Q96BV0 537 aaPredicted RBP11.12□□□□□ -0.63
CCNC-216ENST00000523961 CDRT15Q96T59 188 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 C6orf203Q9P0P8 240 aaPredicted RBP11.12□□□□□ -0.63
CCNC-216ENST00000523961 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 SLC7A7Q9UM01 511 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 RASD1Q9Y272 281 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 MPDZO75970 2070 aa11.12□□□□□ -0.63
CCNC-216ENST00000523961 MRPL33O75394 65 aaKnown RBP11.11□□□□□ -0.63
CCNC-216ENST00000523961 OR5F1O95221 314 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 LYPD3O95274 346 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
CCNC-216ENST00000523961 SERPINA1P01009 418 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 EPXP11678 715 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 PRF1P14222 555 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 NCK1P16333 377 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 IFNA8P32881 189 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 P2RY4P51582 365 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 TLE4Q04727 773 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 IFI44LQ53G44 452 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 TTC33Q6PID6 262 aaPredicted RBP11.11□□□□□ -0.63
CCNC-216ENST00000523961 FKBP9P1Q75LS8 142 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 VTCN1Q7Z7D3 282 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 TSPYL5Q86VY4 417 aaPredicted RBP11.11□□□□□ -0.63
CCNC-216ENST00000523961 P3H2Q8IVL5 708 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 GEMIN6Q8WXD5 167 aaKnown RBP11.11□□□□□ -0.63
CCNC-216ENST00000523961 SLC41A3Q96GZ6 507 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 DACH2Q96NX9 599 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 KLHL4Q9C0H6 718 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 CD300AQ9UGN4 299 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 B3GALT5Q9Y2C3 310 aa11.11□□□□□ -0.63
CCNC-216ENST00000523961 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms