RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 A0A1W2PRM7 423 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 TCRBV9S1A1TA0A576 114 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 TMEM213A2RRL7 107 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 OR6C70A6NIJ9 312 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 SLC22A20A6NK97 555 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 E7ESA3 106 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 M0QXV9 152 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 SLC1A7O00341 560 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 HSD17B6O14756 317 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 EIF4E2O60573 245 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 CTSVO60911 334 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 HPP00738 406 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ATP1A1P05023 1023 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 SLC35E2BP0CK96 405 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 PSKH1P11801 424 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 CTRB1P17538 263 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 PSMC3P17980 439 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 C4BPBP20851 252 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 IVDP26440 423 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 GIFP27352 417 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ZFP36L2P47974 494 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 MRPS22P82650 360 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 LTBQ06643 244 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 PPIDQ08752 370 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 RBBP4Q09028 425 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 STX5Q13190 355 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 QRICH1Q2TAL8 776 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 CTRB2Q6GPI1 263 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 APOBEC3HQ6NTF7 200 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 ADAM5Q6NVV9 412 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ADAMTSL5Q6ZMM2 481 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 LINC00336Q6ZUF6 198 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 C9orf139Q6ZV77 190 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 STX12Q86Y82 276 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 VRK3Q8IV63 474 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 KIRREL3Q8IZU9 778 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 SPAG16Q8N0X2 631 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 NECAP1Q8NC96 275 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 TTLQ8NG68 377 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 OR1L3Q8NH93 324 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ERMNQ8TAM6 284 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 TBCKQ8TEA7 893 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 BAALCQ8WXS3 180 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 TM9SF4Q92544 642 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 SMARCD2Q92925 531 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 TOMM40LQ969M1 308 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 NEIL2Q969S2 332 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 BIRC7Q96CA5 298 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 DUS3LQ96G46 650 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 B3GALT6Q96L58 329 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ZNF670Q9BS34 389 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 BDH2Q9BUT1 245 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 DEFB129Q9H1M3 183 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ASB8Q9H765 288 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 WDR54Q9H977 334 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 SIRT7Q9NRC8 400 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 IL37Q9NZH6 218 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 ZNHIT2Q9UHR6 403 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 LNPEPQ9UIQ6 1025 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 LSM7Q9UK45 103 aaKnown RBP3.44□□□□□ -1.86
SKP1-209ENST00000522552 PPP2R2CQ9Y2T4 447 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 FADS3Q9Y5Q0 445 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 IGHV2-70DA0A0C4DH43 119 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 F8VP50 259 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 H3BN98 237 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 K7ERI5 159 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 K7ESM1 405 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 GOSR2O14653 212 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ADAM10O14672 748 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SPRY3O43610 288 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SYNGR3O43761 229 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CXCL13O43927 109 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PCDH7O60245 1069 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 DUSP11O75319 330 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 OR7A10O76100 309 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ACTL6AO96019 429 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 GP1BAP07359 652 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 KRT7P08729 469 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SMIM10L1P0DMW3 83 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 PCK1P35558 622 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 VHLP40337 213 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 GDI2P50395 445 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 RIPK4P57078 832 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 UBE2KP61086 200 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ERVK11-1P61568 191 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 HERV-K104P61576 105 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 RPL8P62917 257 aaKnown RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 DGCR2P98153 550 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF85Q03923 595 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF33BQ06732 778 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CASP8Q14790 479 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CD226Q15762 336 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 SNCBQ16143 134 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 KCTD19Q17RG1 926 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF672Q499Z4 452 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 ZNF658Q5TYW1 1059 aaPredicted RBP3.43□□□□□ -1.86
SKP1-209ENST00000522552 CD300LGQ6UXG3 332 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 CERS6Q6ZMG9 384 aa3.43□□□□□ -1.86
SKP1-209ENST00000522552 STAC2Q6ZMT1 411 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms