RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 OPN1MW2P0DN77 364 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 OPN1MW3P0DN78 364 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 GFAPP14136 432 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 HPGDP15428 266 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 DDCP20711 480 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 NR4A1P22736 598 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 TYK2P29597 1187 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 CCNG1P51959 295 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 SESN3P58005 492 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 CSNK2A1P68400 391 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 HNRNPA0Q13151 305 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 SNTB2Q13425 540 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 SLC17A1Q14916 467 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 SYT14P1Q58G82 188 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 KRT80Q6KB66 452 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 C3orf33Q6P1S2 294 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 KLHL24Q6TFL4 600 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 LRIG3Q6UXM1 1119 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 C9orf139Q6ZV77 190 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF771Q7L3S4 317 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 MTERF4Q7Z6M4 381 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PDIK1LQ8N165 341 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 NOA1Q8NC60 698 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 OR6Y1Q8NGX8 325 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 OR5W2Q8NH69 310 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 SELENOMQ8WWX9 145 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 RAB39BQ96DA2 213 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF385AQ96PM9 386 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 SYT3Q9BQG1 590 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF416Q9BWM5 594 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 OR11A1Q9GZK7 315 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PRDM13Q9H4Q3 707 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 ELOVL6Q9H5J4 265 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 MBNL3Q9NUK0 354 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 GIMAP4Q9NUV9 329 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 OXSMQ9NWU1 459 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PCTPQ9UKL6 214 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 CMAHPQ9Y471 501 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 WIPI2Q9Y4P8 454 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PCLOQ9Y6V0 5065 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 IGHV3OR16-10A0A075B7F0 116 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 TTC36A6NLP5 189 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 SYCE1LA8MT33 242 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 H0YL77 283 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 TRAF3IP2O43734 574 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 PMS2P2O95744 297 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 PRPS2P11908 318 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 CBR1P16152 277 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 LCN1P31025 176 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 ATP4BP51164 291 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 CLCQ05315 142 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF154Q13106 437 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 DAG1Q14118 895 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 HEPACAMQ14CZ8 416 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 ARMCX4Q5H9R4 360 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 METTL2BQ6P1Q9 378 aaKnown RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 FIP1L1Q6UN15 594 aaKnown RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 SYT10Q6XYQ8 523 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 NLRC3Q7RTR2 1065 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 CDRT4Q8N9R6 151 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 FBXO36Q8NEA4 188 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 PIGXQ8TBF5 258 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 MAGEE2Q8TD90 523 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 ATP6V1E2Q96A05 226 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 LRRC39Q96DD0 335 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 AURKBQ96GD4 344 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 EBPLQ9BY08 206 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 ACPTQ9BZG2 426 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 CHIAQ9BZP6 476 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 SHCBP1LQ9BZQ2 653 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 TCF7L1Q9HCS4 588 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 TMEM45AQ9NWC5 275 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 PARPBPQ9NWS1 579 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 GIN1Q9NXP7 522 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 NSMCE4AQ9NXX6 385 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 PURGQ9UJV8 347 aaKnown RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 FZR1Q9UM11 496 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 TNPO3Q9Y5L0 923 aaKnown RBP7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 AUP1Q9Y679 476 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
TRAPPC9-212ENST00000521944 NUP214P35658 2090 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 GNG14A0A1W2PPG7 69 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 VSTM5A8MXK1 200 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 FRS3O43559 492 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 SKAP2O75563 359 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 PLATP00750 562 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 IFI6P09912 130 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 TSPAN8P19075 237 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 ARL1P40616 181 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 MAGEA8P43361 318 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 MERTKQ12866 999 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 FAM71E1Q6IPT2 247 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 GAS2L3Q86XJ1 694 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 MMGT1Q8N4V1 131 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 PTGR2Q8N8N7 351 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 GLB1L3Q8NCI6 653 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 RFWD2Q8NHY2 731 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 TMEM45BQ96B21 275 aa7.49□□□□□ -1.21
TRAPPC9-212ENST00000521944 Q96M66 194 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms