RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PGAM2P15259 253 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 GCAP28676 217 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 CCR1P32246 355 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 MDH2P40926 338 aaKnown RBP2.55□□□□□ -2
HMGN1P28-201ENST00000521340 MEOX2P50222 304 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 DAP3P51398 398 aaKnown RBP2.55□□□□□ -2
HMGN1P28-201ENST00000521340 RIPPLY3P57055 190 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 RIPK4P57078 832 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 CUL2Q13617 745 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 EIF3AQ14152 1382 aaKnown RBP2.55□□□□□ -2
HMGN1P28-201ENST00000521340 TIMM50Q3ZCQ8 353 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 EIPR1Q53HC9 387 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 OR2B11Q5JQS5 317 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 H2BFWTQ7Z2G1 175 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 MARCH9Q86YJ5 346 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 EGFL6Q8IUX8 553 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 FAM83FQ8NEG4 500 aaPredicted RBP2.55□□□□□ -2
HMGN1P28-201ENST00000521340 SDR9C7Q8NEX9 313 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 OR52H1Q8NGJ2 320 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 TYMSOSQ8TAI1 123 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 ZPLD1Q8TCW7 415 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 SLC2A14Q8TDB8 520 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 PAXXQ9BUH6 204 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 TRIM62Q9BVG3 475 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 NUDT15Q9NV35 164 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 OR1A1Q9P1Q5 309 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 REREQ9P2R6 1566 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 PHF11Q9UIL8 331 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 IFT52Q9Y366 437 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 NRXN3Q9Y4C0 1643 aa2.55□□□□□ -2
HMGN1P28-201ENST00000521340 MARF1Q9Y4F3 1742 aaKnown RBP2.55□□□□□ -2
HMGN1P28-201ENST00000521340 CSDC2Q9Y534 153 aaKnown RBP2.55□□□□□ -2
HMGN1P28-201ENST00000521340 KIF13AQ9H1H9 1805 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 LRRC37A3O60309 1634 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 LRRC7Q96NW7 1537 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 PLEKHH1Q9ULM0 1364 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 IGHV1OR15-1A0A075B7D0 117 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 A0A1B0GUS0 222 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 IDSB3KWA1 339 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 TRDCB7Z8K6 153 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 OR10H3O60404 316 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 CLDN9O95484 217 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 AP2A1O95782 977 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 ACADSP16219 412 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 ZP3P21754 424 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 NF2P35240 595 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 LEPP41159 167 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 SLC25A1P53007 311 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 SUCLG1P53597 346 aaKnown RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 RPL32P62910 135 aaKnown RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 IRX3P78415 501 aaPredicted RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 ZNF763Q0D2J5 394 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 QRICH1Q2TAL8 776 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 BCL7AQ4VC05 210 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 PRAMEF5Q5TYX0 476 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 PRAMEF6Q5VXH4 476 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 SLC25A48Q6ZT89 311 aaKnown RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 PRSS41Q7RTY9 318 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 ECHDC2Q86YB7 292 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 OR1L6Q8NGR2 347 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 OR13F1Q8NGS4 319 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 MRAPQ8TCY5 172 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 CHCHD10Q8WYQ3 142 aaPredicted RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 RASD2Q96D21 266 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 TM4SF19Q96DZ7 209 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 CNOT6LQ96LI5 555 aaKnown RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 RBM14Q96PK6 669 aaKnown RBP2.54□□□□□ -2
HMGN1P28-201ENST00000521340 PSMB7Q99436 277 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 GLT8D2Q9H1C3 349 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 SPATA7Q9P0W8 599 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 DPM3Q9P2X0 92 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 SUN2Q9UH99 717 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 NPTNQ9Y639 398 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 MAD1L1Q9Y6D9 718 aa2.54□□□□□ -2
HMGN1P28-201ENST00000521340 NKTRP30414 1462 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 NINLQ9Y2I6 1382 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 TCHHQ07283 1943 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 IGLV8-61A0A075B6I0 122 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 OR2AG2A6NM03 316 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 K7N7A8 449 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 DCTN6O00399 190 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 GPAA1O43292 621 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 CACNG3O60359 315 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 DIRAS1O95057 198 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 C1orf105O95561 183 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 LGI1O95970 557 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 IGHV3-48P01763 117 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 IGHV3-23P01764 117 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 SEMG1P04279 462 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 LGALS2P05162 132 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 P0C879 139 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 PABPC4LP0CB38 370 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 TOP1P11387 765 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 KITLGP21583 273 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 AQP1P29972 269 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 GNA11P29992 359 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 FGF9P31371 208 aaPredicted RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 ANP32AP39687 249 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 RPL13AP40429 203 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 EPS15P42566 896 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms