RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 YAE1D1Q9NRH1 226 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 ATP23Q9Y6H3 246 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 PLCE1Q9P212 2302 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 A0A096LNT2 108 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 AQP7P3A6NL99 342 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 ANP32DO95626 131 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 BCHEP06276 602 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 CRATP43155 626 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 CRISP3P54108 245 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 PRPS1P60891 318 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 DSTNP60981 165 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 COPZ1P61923 177 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 RAB35Q15286 201 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 ZSWIM7Q19AV6 140 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 ATG16L1Q676U5 607 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 HIPK1Q86Z02 1210 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 CADM2Q8N3J6 435 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 POMGNT2Q8NAT1 580 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 MGARPQ8TDB4 240 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 SLC38A5Q8WUX1 472 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 TPT1P8Q9HAU6 139 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 ZIM2Q9NZV7 527 aa17.2■□□□□ 0.34
PABPC1-215ENST00000520804 ZNF443Q9Y2A4 671 aaPredicted RBP17.2■□□□□ 0.34
PABPC1-215ENST00000520804 SONP18583 2426 aaKnown RBP17.2■□□□□ 0.34
PABPC1-215ENST00000520804 FAM234BA2RU67 622 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 A8MVM7 634 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 H7C417 338 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 BNIP2Q12982 314 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 LARS2Q15031 903 aaKnown RBP17.19■□□□□ 0.34
PABPC1-215ENST00000520804 SLC9B1Q4ZJI4 515 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 MSANTD1Q6ZTZ1 278 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 GPAT4Q86UL3 456 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 CLIP4Q8N3C7 705 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 BOD1Q96IK1 185 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 ITCHQ96J02 903 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 TAPBPLQ9BX59 468 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 RMND5AQ9H871 391 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 SDR39U1Q9NRG7 319 aaPredicted RBP17.19■□□□□ 0.34
PABPC1-215ENST00000520804 CHST2Q9Y4C5 530 aa17.19■□□□□ 0.34
PABPC1-215ENST00000520804 ELOA3DA6NLF2 546 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-215ENST00000520804 GPRIN2O60269 458 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 WNT11O96014 354 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 PRG2P13727 222 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 P2RY4P51582 365 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 SLC18A1P54219 525 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 ELOA3BQ3SY89 546 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 GTDC1Q4AE62 458 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 RPS26P11Q5JNZ5 115 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-215ENST00000520804 TMEM225Q6GV28 225 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 KLHL24Q6TFL4 600 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 MAVSQ7Z434 540 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 ABHD12BQ7Z5M8 362 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-215ENST00000520804 ELOA3Q8NG57 546 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 SPATA3Q8NHX4 192 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 HTRA1Q92743 480 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 AURKBQ96GD4 344 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-215ENST00000520804 TMEM19Q96HH6 336 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 ADPRHL2Q9NX46 363 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 THUMPD1Q9NXG2 353 aaKnown RBP17.18■□□□□ 0.34
PABPC1-215ENST00000520804 ZNF232Q9UNY5 417 aa17.18■□□□□ 0.34
PABPC1-215ENST00000520804 HEATR1Q9H583 2144 aaKnown RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 A0A0G2JPF8 293 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 A8MV72 311 aaPredicted RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 HNRNPCL2B2RXH8 293 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 HNRNPCL3B7ZW38 293 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 FRS3O43559 492 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 HNRNPCL1O60812 293 aaKnown RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 NPIPB7O75200 414 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 VAMP5O95183 116 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 HNRNPCL4P0DMR1 293 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 BMP4P12644 408 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 CDH2P19022 906 aaPredicted RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 NCF2P19878 526 aaPredicted RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 APOBEC3AP31941 199 aaPredicted RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 CHRNB3Q05901 458 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 LOXL1Q08397 574 aaPredicted RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 HIKESHIQ53FT3 197 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 C1orf140Q5VVS0 124 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 HMBOX1Q6NT76 420 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 CREB3L2Q70SY1 520 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 ALPK2Q86TB3 2170 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 ZNF525Q8N782 197 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 VPS33AQ96AX1 596 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 OR52B2Q96RD2 323 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 TNFRSF13CQ96RJ3 184 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 SPATA9Q9BWV2 254 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 MANSC1Q9H8J5 431 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 OBP2BQ9NPH6 170 aa17.17■□□□□ 0.34
PABPC1-215ENST00000520804 FBN1P35555 2871 aaKnown RBP17.17■□□□□ 0.34
PABPC1-215ENST00000520804 A0A096LPI6 279 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 TMEM247A6NEH6 219 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 ATP6V1G2-DDX39BF2Z307 99 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-215ENST00000520804 KRT33AO76009 404 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 SLC25A16P16260 332 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 SELENOPP49908 381 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 POLR2JP52435 117 aaKnown RBP17.16■□□□□ 0.34
PABPC1-215ENST00000520804 TMEM249Q2WGJ8 235 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 C6orf10Q5SRN2 563 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 C6orf52Q5T4I8 152 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms