RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	GCSAM	Q8N6F7	178 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	CATSPER1	Q8NEC5	780 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	NFAM1	Q8NET5	270 aa	Predicted RBP	6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	B3GNT7	Q8NFL0	401 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	TCP10L	Q8TDR4	215 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	AGAP11	Q8TF27	550 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	DAZL	Q92904	295 aa	Known RBP	6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ANKRD9	Q96BM1	317 aa	Predicted RBP	6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	CNDP1	Q96KN2	507 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF354B	Q96LW1	612 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZIM3	Q96PE6	472 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	KCNA7	Q96RP8	456 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	HBEGF	Q99075	208 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	SHCBP1L	Q9BZQ2	653 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	TRIM4	Q9C037	500 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	HRH4	Q9H3N8	390 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	WDR41	Q9HAD4	459 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF556	Q9HAH1	456 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ADAP2	Q9NPF8	381 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLC17A7	Q9P2U7	560 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	OR2W1	Q9Y3N9	320 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	TIMM22	Q9Y584	194 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	CLCA3P	Q9Y6N3	262 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	GCN1	Q92616	2671 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	MYO18B	Q8IUG5	2567 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	TRAV17	A0A0B4J275	112 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	TRBV11-1	A0A0K0K1C0	115 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	WASHC1	A8K0Z3	465 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	C17orf105	B2RV13	164 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PRAC2	D3DTV9	90 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PGRMC2	O15173	223 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	TYROBP	O43914	113 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	FGF17	O60258	216 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	OR10H2	O60403	315 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	TMCC2	O75069	709 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PRKRA	O75569	313 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	SORBS2	O94875	1100 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	GPR75	O95800	540 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	AIFM1	O95831	613 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	WDPCP	O95876	746 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	F10	P00742	488 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	UROS	P10746	265 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	FUT6	P51993	359 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	FOXA1	P55317	472 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	HMGCS1	Q01581	520 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	FOLH1	Q04609	750 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	BIK	Q13323	160 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	MEP1A	Q16819	746 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	IMPG1	Q17R60	797 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	BEND6	Q5SZJ8	279 aa	Predicted RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	NDUFAF5	Q5TEU4	345 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	FAM219B	Q5XKK7	198 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	CUZD1	Q86UP6	607 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	RPS19BP1	Q86WX3	136 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	CRLF3	Q8IUI8	442 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PM20D2	Q8IYS1	436 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	KIF2B	Q8N4N8	673 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	C1orf52	Q8N6N3	182 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	MORN4	Q8NDC4	146 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PTPMT1	Q8WUK0	201 aa	Predicted RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLC38A5	Q8WUX1	472 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	HAS2	Q92819	552 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PPWD1	Q96BP3	646 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	SAT2	Q96F10	170 aa	Predicted RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PGM2	Q96G03	612 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	VMP1	Q96GC9	406 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	RBM18	Q96H35	190 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	DGAT2	Q96PD7	388 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	DEFB126	Q9BYW3	111 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	ACPT	Q9BZG2	426 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	STMN4	Q9H169	189 aa	Predicted RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	EML4	Q9HC35	981 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	TEX10	Q9NXF1	929 aa	Predicted RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PCDHGB4	Q9UN71	923 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	PPIE	Q9UNP9	301 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	DLGAP4	Q9Y2H0	992 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	CSAG2	Q9Y5P2	127 aa		6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	SNRNP200	O75643	2136 aa	Known RBP	6.22	□□□□□ -1.41
SDCBP-208	ENST00000520228	GNG14	A0A1W2PPG7	69 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	OR5H15	A6NDH6	313 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	GOLGA6L10	A6NI86	522 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	AZIN1	O14977	448 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	WISP2	O76076	250 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	ZFAND5	O76080	213 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	BPGM	P07738	259 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	SLC35E2	P0CK97	266 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	MMP9	P14780	707 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	PIK3R1	P27986	724 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	TNFSF10	P50591	281 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	XK	P51811	444 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	PNLIPRP2	P54317	469 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	ISL1	P61371	349 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	TRA2B	P62995	288 aa	Known RBP	6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	IGLV3-21	P80748	117 aa	Predicted RBP	6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	PLIN5	Q00G26	463 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	OC90	Q02509	493 aa	Predicted RBP	6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	IGFBP7	Q16270	282 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	PRR30	Q53SZ7	412 aa	Predicted RBP	6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	SPIN4	Q56A73	249 aa		6.21	□□□□□ -1.42
SDCBP-208	ENST00000520228	RUSC1-AS1	Q66K80	236 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms