RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FTMTQ8N4E7 242 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 CCDC71LQ8N9Z2 235 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR1L6Q8NGR2 347 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 SPATA3Q8NHX4 192 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 DNAJA4Q8WW22 397 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 NEIL2Q969S2 332 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 FAM122AQ96E09 287 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 PLEKHA8Q96JA3 519 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 HIST1H4GQ99525 98 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 ANP32EQ9BTT0 268 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 ILKAPQ9H0C8 392 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 THUMPD1Q9NXG2 353 aaKnown RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 VNN3Q9NY84 501 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 RABL2AQ9UBK7 228 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 SLC7A8Q9UHI5 535 aa3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZNF107Q9UII5 783 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 CAB39Q9Y376 341 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P46-201ENST00000520062 A0A075B6Q4 140 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 TUBAL3A6NHL2 446 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR5B21A6NL26 309 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 ABCD4O14678 606 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 LGI1O95970 557 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 IGHV3-48P01763 117 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 MMP1P03956 469 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 CCDC166P0CW27 439 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 KITLGP21583 273 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 GALP22466 123 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 RDXP35241 583 aaKnown RBP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 KPNA2P52292 529 aaKnown RBP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 XKR7Q5GH72 579 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 RAET1LQ5VY80 246 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 LRRC31Q6UY01 552 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 LRRC74BQ6ZQY2 392 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 GPD1LQ8N335 351 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 TPRX1Q8N7U7 411 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR4F6Q8NGB9 312 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR4K14Q8NGD5 310 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 FAM110BQ8TC76 370 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 CHCHD10Q8WYQ3 142 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 PANX2Q96RD6 677 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 CNPY3Q9BT09 278 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 FAM192AQ9GZU8 254 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 EHD1Q9H4M9 534 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 NCOR1P1Q9H4R4 102 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 PSMC3IPQ9P2W1 217 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 ABCD2Q9UBJ2 740 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 Q9UF83 564 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 STAP1Q9ULZ2 295 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 KCNIP3Q9Y2W7 256 aa3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
HMGB1P46-201ENST00000520062 A0A0G2JRQ6 117 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 TCP11X1B4DZS4 312 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 KRT6AP02538 564 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 P0C879 139 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 PABPC4LP0CB38 370 aaKnown RBP3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 RBMY1CP0DJD4 496 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 TNNI1P19237 187 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 SHMT2P34897 504 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 KIR2DS4P43632 304 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 ENPEPQ07075 957 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 PPIL2Q13356 520 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 BCL7AQ4VC05 210 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 SLC25A30Q5SVS4 291 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 LRRC66Q68CR7 880 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 VRK2Q86Y07 508 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 RDH10Q8IZV5 341 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 SDR9C7Q8NEX9 313 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR4C5Q8NGB2 326 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 SETD7Q8WTS6 366 aaKnown RBP3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 ANKRD49Q8WVL7 239 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 OR1E3Q8WZA6 343 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 TM4SF19Q96DZ7 209 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 MOKQ9UQ07 419 aa3.92□□□□□ -1.78
HMGB1P46-201ENST00000520062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 FRMPD3Q5JV73 1810 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 IGHV3OR16-13A0A075B7E8 117 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 DNALI1O14645 258 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 RNF13O43567 381 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 CACNG3O60359 315 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 P04436 131 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 FGF1P05230 155 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 HSD17B2P37059 387 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 FDFT1P37268 417 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 ATP5OP48047 213 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 HCFC1P51610 2035 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 KCNJ2P63252 427 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 EOGTQ5NDL2 527 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 Q6ZR54 194 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 SLC25A48Q6ZT89 311 aaKnown RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 HSD17B13Q7Z5P4 300 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZNF589Q86UQ0 364 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 ERI1Q8IV48 349 aaKnown RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 BRSK1Q8TDC3 778 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 PYROXD1Q8WU10 500 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 MCUR1Q96AQ8 359 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 CHP1Q99653 195 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms