RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 CENPHQ9H3R5 247 aa7.55□□□□□ -1.2
PABPC1-213ENST00000519848 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
PABPC1-213ENST00000519848 SLC17A5Q9NRA2 495 aa7.55□□□□□ -1.2
PABPC1-213ENST00000519848 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
PABPC1-213ENST00000519848 CISD1Q9NZ45 108 aaKnown RBP7.55□□□□□ -1.2
PABPC1-213ENST00000519848 EDARQ9UNE0 448 aa7.55□□□□□ -1.2
PABPC1-213ENST00000519848 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-213ENST00000519848 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
PABPC1-213ENST00000519848 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-213ENST00000519848 NOSIPQ9Y314 301 aaKnown RBP7.55□□□□□ -1.2
PABPC1-213ENST00000519848 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 UQCRHLA0A096LP55 91 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 IGHV1-18A0A0C4DH31 117 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 GJE1A6NN92 205 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 M0R1B8 84 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 NR5A2O00482 541 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 FAAHO00519 579 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 KLF11O14901 512 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 PAX4O43316 350 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 SSX4O60224 188 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 TPST1O60507 370 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 TPST2O60704 377 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 FZD7O75084 574 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 UPK3AO75631 287 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 SEC14L2O76054 403 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 CALCRP30988 508 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 CHI3L1P36222 383 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 APOBEC1P41238 236 aaKnown RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 HNRNPA0Q13151 305 aaKnown RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 MAD2L1Q13257 205 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 CEACAM7Q14002 265 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 LRRC74BQ6ZQY2 392 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 ZNF621Q6ZSS3 439 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 IL17RELQ6ZVW7 336 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 EPHX4Q8IUS5 362 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 PHC2Q8IXK0 858 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 ZNF100Q8IYN0 542 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 NATD1Q8N6N6 113 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 OR10H5Q8NGA6 315 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 ZNF563Q8TA94 476 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 SLC25A43Q8WUT9 341 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 HSD17B8Q92506 261 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 C3orf49Q96BT1 292 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 TRIM44Q96DX7 344 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 PANX1Q96RD7 426 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 PRPF18Q99633 342 aaKnown RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 PAIP2Q9BPZ3 127 aaKnown RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 CXorf56Q9H5V9 222 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 KCNK9Q9NPC2 374 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 SLCO1B3Q9NPD5 702 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 TIGARQ9NQ88 270 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 SDR39U1Q9NRG7 319 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-213ENST00000519848 EXD2Q9NVH0 621 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 HDGFL3Q9Y3E1 203 aa7.54□□□□□ -1.2
PABPC1-213ENST00000519848 AQP7P3A6NL99 342 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 DUXAA6NLW8 204 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 LRRN3E7EW58 273 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 HDAC3O15379 428 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 ZNF500O60304 480 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 LGI1O95970 557 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 HPRP00739 348 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 ZNF16P17020 682 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 TTKP33981 857 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 POLR2HP52434 150 aaKnown RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 CRYBA2P53672 197 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 CLNS1AP54105 237 aaKnown RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 MAGOHP61326 146 aaKnown RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 DMTNQ08495 405 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 SELPLGQ14242 412 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 OR7A5Q15622 319 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 PDCD4Q53EL6 469 aaKnown RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 PAGE3Q5JUK9 113 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 OTUD3Q5T2D3 398 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 NHLRC1Q6VVB1 395 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 CXXC5Q7LFL8 322 aaKnown RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 UBE2J2Q8N2K1 259 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 ANKS4BQ8N8V4 417 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 OR9K2Q8NGE7 335 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 PIGXQ8TBF5 258 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 TMEM234Q8WY98 164 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 KTI12Q96EK9 354 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 HDHD5Q9BXW7 423 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-213ENST00000519848 TAS2R16Q9NYV7 291 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 TMEM181Q9P2C4 612 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 STOML1Q9UBI4 398 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 MOKQ9UQ07 419 aa7.53□□□□□ -1.2
PABPC1-213ENST00000519848 RTTNQ86VV8 2226 aa7.52□□□□□ -1.2
PABPC1-213ENST00000519848 FAM234BA2RU67 622 aa7.52□□□□□ -1.21
PABPC1-213ENST00000519848 CFAP73A6NFT4 308 aa7.52□□□□□ -1.21
PABPC1-213ENST00000519848 VWC2LB2RUY7 222 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms