RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 MED31Q9Y3C7 131 aa11.65□□□□□ -0.54
PABPC1-205ENST00000518196 IGKV1D-42A0A075B6H8 117 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 HTR3EA5X5Y0 456 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 CLCA1A8K7I4 914 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 TNFRSF11BO00300 401 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 DNPH1O43598 174 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 DEAF1O75398 565 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-205ENST00000518196 IMPDH2P12268 514 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 FCGR1AP12314 374 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 ACVR2AP27037 513 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
PABPC1-205ENST00000518196 GTF2E2P29084 291 aaKnown RBP11.64□□□□□ -0.55
PABPC1-205ENST00000518196 RPS5P46782 204 aaKnown RBP11.64□□□□□ -0.55
PABPC1-205ENST00000518196 UGT2B15P54855 530 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 GK3PQ14409 553 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 ESPL1Q14674 2120 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 OR7A5Q15622 319 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 FAM69AQ5T7M9 428 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 C1QL3Q5VWW1 255 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 P4HA3Q7Z4N8 544 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 P3H2Q8IVL5 708 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 CDK20Q8IZL9 346 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 C10orf53Q8N6V4 93 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 OR52J3Q8NH60 311 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 MFSD8Q8NHS3 518 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 STMN2Q93045 179 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 SLC25A36Q96CQ1 311 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-205ENST00000518196 NAA11Q9BSU3 229 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-205ENST00000518196 ZNF426Q9BUY5 554 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 CALHM2Q9HA72 323 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 DNAJB9Q9UBS3 223 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 ZNF175Q9Y473 711 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 KIAA1549Q9HCM3 1950 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 ZFYVE26Q68DK2 2539 aa11.64□□□□□ -0.55
PABPC1-205ENST00000518196 ARHGAP21Q5T5U3 1957 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 A0A087WUU8 490 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 CD8B2A6NJW9 211 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 LIPT2A6NK58 231 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 KPNA4O00629 521 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-205ENST00000518196 CLOCKO15516 846 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 EIF1BO60739 113 aaKnown RBP11.63□□□□□ -0.55
PABPC1-205ENST00000518196 TIPRLO75663 272 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 IGF2P01344 180 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 STSP08842 583 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 FAM157BP0CG42 384 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 PTNP21246 168 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 FPR1P21462 350 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 ENPP1P22413 925 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 GNLYP22749 145 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 FASP25445 335 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 CA7P43166 264 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 HMGA2P52926 109 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 TNP2Q05952 138 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 PON3Q15166 354 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 ACSF3Q4G176 576 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-205ENST00000518196 NSUN5P2Q63ZY6 315 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 GTF2IRD2BQ6EKJ0 949 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 TMEM211Q6ICI0 200 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 B3GNT6Q6ZMB0 384 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 MBOAT2Q6ZWT7 520 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 GTF2IRD2Q86UP8 949 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 LINC00471Q8N535 108 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 SLC7A13Q8TCU3 470 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 PYDC1Q8WXC3 89 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 TAAR8Q969N4 342 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 SGTBQ96EQ0 304 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 DNAJA3Q96EY1 480 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 ZNF845Q96IR2 970 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-205ENST00000518196 ALPK1Q96QP1 1244 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 C6orf203Q9P0P8 240 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-205ENST00000518196 TINAGQ9UJW2 476 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 SAMHD1Q9Y3Z3 626 aaKnown RBP11.63□□□□□ -0.55
PABPC1-205ENST00000518196 LYVE1Q9Y5Y7 322 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 KALRNO60229 2985 aa11.63□□□□□ -0.55
PABPC1-205ENST00000518196 PHF3Q92576 2039 aaKnown RBP11.62□□□□□ -0.55
PABPC1-205ENST00000518196 TRBV4-1A0A0J9YWV2 114 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 A0A1B0GUH1 482 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 SH3PXD2BA1X283 911 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 E9PLN8 166 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 ENTPD5O75356 428 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 CH25HO95992 272 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 MT-ATP6P00846 226 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 LDLRP01130 860 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 BGLAPP02818 100 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 HIST1H2ABP04908 130 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 FCGR2AP12318 317 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 IFI30P13284 250 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 CD33P20138 364 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 IFNGR2P38484 337 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 ARHGDIAP52565 204 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 AGFG1P52594 562 aaKnown RBP11.62□□□□□ -0.55
PABPC1-205ENST00000518196 NUP107P57740 925 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 PRKCDQ05655 676 aa11.62□□□□□ -0.55
PABPC1-205ENST00000518196 EXOC3L2Q2M3D2 409 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms