RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CASP12Q6UXS9 341 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 GALNT5Q7Z7M9 940 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 SLC43A2Q8N370 569 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 KDM8Q8N371 416 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 ARFGAP2Q8N6H7 521 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 ARIH2OSQ8N7S6 290 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 SLC38A5Q8WUX1 472 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 WDR60Q8WVS4 1066 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 ARL8AQ96BM9 186 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 TMEM19Q96HH6 336 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 MUS81Q96NY9 551 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 TRNT1Q96Q11 434 aaKnown RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 OR52E6Q96RD3 313 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 EBF4Q9BQW3 602 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 TACO1Q9BSH4 297 aaKnown RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 ADAM19Q9H013 955 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 CENPHQ9H3R5 247 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 SLC17A5Q9NRA2 495 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 CISD1Q9NZ45 108 aaKnown RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 EDARQ9UNE0 448 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 NOSIPQ9Y314 301 aaKnown RBP7.55□□□□□ -1.2
PABPC1-202ENST00000517403 CORINQ9Y5Q5 1042 aa7.55□□□□□ -1.2
PABPC1-202ENST00000517403 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 UQCRHLA0A096LP55 91 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 IGHV1-18A0A0C4DH31 117 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 GJE1A6NN92 205 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 M0R1B8 84 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 NR5A2O00482 541 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 FAAHO00519 579 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 KLF11O14901 512 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SSX4O60224 188 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 TPST1O60507 370 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 TPST2O60704 377 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 FZD7O75084 574 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 UPK3AO75631 287 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SEC14L2O76054 403 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 CALCRP30988 508 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 CHI3L1P36222 383 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 APOBEC1P41238 236 aaKnown RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 HNRNPA0Q13151 305 aaKnown RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 MAD2L1Q13257 205 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 CEACAM7Q14002 265 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 VHLLQ6RSH7 139 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 LRRC74BQ6ZQY2 392 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 ZNF621Q6ZSS3 439 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 IL17RELQ6ZVW7 336 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 EPHX4Q8IUS5 362 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 PHC2Q8IXK0 858 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 ZNF100Q8IYN0 542 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 NATD1Q8N6N6 113 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 OR10H5Q8NGA6 315 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 ZNF563Q8TA94 476 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SLC25A43Q8WUT9 341 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 HSD17B8Q92506 261 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 C3orf49Q96BT1 292 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 TRIM44Q96DX7 344 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 PANX1Q96RD7 426 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 PRPF18Q99633 342 aaKnown RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 PAIP2Q9BPZ3 127 aaKnown RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 CXorf56Q9H5V9 222 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 KCNK9Q9NPC2 374 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SLCO1B3Q9NPD5 702 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 TIGARQ9NQ88 270 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SDR39U1Q9NRG7 319 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-202ENST00000517403 EXD2Q9NVH0 621 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 HDGFL3Q9Y3E1 203 aa7.54□□□□□ -1.2
PABPC1-202ENST00000517403 SLC35F4A4IF30 521 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 AQP7P3A6NL99 342 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 DUXAA6NLW8 204 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 LRRN3E7EW58 273 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 HDAC3O15379 428 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 ZNF500O60304 480 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-202ENST00000517403 LGI1O95970 557 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 HPRP00739 348 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
PABPC1-202ENST00000517403 TTKP33981 857 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 POLR2HP52434 150 aaKnown RBP7.53□□□□□ -1.2
PABPC1-202ENST00000517403 CRYBA2P53672 197 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 CLNS1AP54105 237 aaKnown RBP7.53□□□□□ -1.2
PABPC1-202ENST00000517403 MAGOHP61326 146 aaKnown RBP7.53□□□□□ -1.2
PABPC1-202ENST00000517403 DMTNQ08495 405 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 SELPLGQ14242 412 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 OR7A5Q15622 319 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 PDCD4Q53EL6 469 aaKnown RBP7.53□□□□□ -1.2
PABPC1-202ENST00000517403 PAGE3Q5JUK9 113 aa7.53□□□□□ -1.2
PABPC1-202ENST00000517403 OTUD3Q5T2D3 398 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms