RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 PAX2Q02962 417 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 LTBQ06643 244 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 LAGE3Q14657 143 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAM189A2Q15884 450 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 NDUFA9Q16795 377 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 QRICH1Q2TAL8 776 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 UNC50Q53HI1 259 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF658Q5TYW1 1059 aaPredicted RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 TTC33Q6PID6 262 aaPredicted RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 SPESP1Q6UW49 350 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 C3P1Q6ZMU1 363 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRSS48Q7RTY5 328 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR2W3Q7Z3T1 314 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 UNC93AQ86WB7 457 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR2L13Q8N349 312 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 MREGQ8N565 214 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 NECAP1Q8NC96 275 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 NOXO1Q8NFA2 376 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ERMNQ8TAM6 284 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 PHOSPHO2Q8TCD6 241 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 TBCKQ8TEA7 893 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 APOBEC4Q8WW27 367 aaKnown RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 BAALCQ8WXS3 180 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 SMARCD2Q92925 531 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 TOMM40LQ969M1 308 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMEM143Q96AN5 459 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5B2Q96R09 309 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 TNFRSF13CQ96RJ3 184 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 APOL2Q9BQE5 337 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 RHNO1Q9BSD3 238 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 TIMM29Q9BSF4 260 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 DCUN1D5Q9BTE7 237 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC40A1Q9NP59 571 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF224Q9NZL3 707 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ST6GALNAC2Q9UJ37 374 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 POU2F3Q9UKI9 436 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 KCNIP3Q9Y2W7 256 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 CDH10Q9Y6N8 788 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 A0A0G2JLW4 131 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF587BE7ETH6 402 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 F8VP50 259 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 H0YHG0 523 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 K7ESM1 405 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 M0QXV9 152 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 PLPP1O14494 284 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 HSD17B6O14756 317 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 MSTNO14793 375 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 RAD51BO15315 384 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 CXCL13O43927 109 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF189O75820 626 aaPredicted RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 CLIC3O95833 236 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 IGHG4P01861 327 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 HLA-DRAP01903 254 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 FGGP02679 453 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRSS56P0CW18 603 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 CDH1P12830 882 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 C4BPBP20851 252 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 EDNRAP25101 427 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 IVDP26440 423 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 KDELR2P33947 212 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SOX3P41225 446 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 TNFSF9P41273 254 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTR1BP42025 376 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 CSNK1A1P48729 337 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 XKP51811 444 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ELLP55199 621 aaPredicted RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 TFF2Q03403 129 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 PPIDQ08752 370 aaKnown RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 EMC2Q15006 297 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZSCAN26Q16670 478 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 EXOC3L4Q17RC7 722 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOLGA7BQ2TAP0 167 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ODF3L2Q3SX64 289 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF260Q3ZCT1 412 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 TIGITQ495A1 244 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 DNAL1Q4LDG9 190 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 VWA2Q5GFL6 755 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ADAMTSL5Q6ZMM2 481 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ABHD13Q7L211 337 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF547Q8IVP9 402 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 KIRREL3Q8IZU9 778 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF786Q8N393 782 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 LIX1Q8N485 282 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 MS4A15Q8N5U1 240 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 RBMXL3Q8N7X1 1067 aaKnown RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 C15orf54Q8N8G6 183 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 CATSPER1Q8NEC5 780 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR1S2Q8NGQ3 325 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR1K1Q8NGR3 316 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR4Q3Q8NH05 313 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5B3Q8NH48 314 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR1L3Q8NH93 324 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC7A13Q8TCU3 470 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SARAFQ96BY9 339 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 BIRC7Q96CA5 298 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 RAB3CQ96E17 227 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUS3LQ96G46 650 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms