RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 IL11P20809 199 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RPS4Y1P22090 263 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CHMP24386 653 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SLC7A1P30825 629 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MSX2P35548 267 aaPredicted RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ACAA2P42765 397 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 KCNJ5P48544 419 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RGS8P57771 180 aaPredicted RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 B3GALT5-AS1P59052 145 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 EEF1A1P68104 462 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SRSF3P84103 164 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CRYZQ08257 329 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MERTKQ12866 999 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 FOXF1Q12946 379 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 FOXD4Q12950 439 aaPredicted RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SKP2Q13309 424 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ESPL1Q14674 2120 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RAB39AQ14964 217 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SF3B4Q15427 424 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SGCBQ16585 318 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PLPPR5Q32ZL2 321 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TMEM176BQ3YBM2 270 aaPredicted RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GLIPR1L2Q4G1C9 344 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CYBRD1Q53TN4 286 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NHSL2Q5HYW2 709 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 C1QL3Q5VWW1 255 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TMEM200BQ69YZ2 307 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 C8orf82Q6P1X6 216 aaPredicted RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DHRS4L2Q6PKH6 230 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 C3P1Q6ZMU1 363 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CCDC80Q76M96 950 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 FJX1Q86VR8 437 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GRAMD2AQ8IUY3 354 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CHERPQ8IWX8 916 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 UBQLNLQ8IYU4 475 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GTPBP8Q8N3Z3 284 aaPredicted RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PIK3C3Q8NEB9 887 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 OR10Q1Q8NGQ4 319 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 POC1BQ8TC44 478 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RASSF5Q8WWW0 418 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 LZICQ8WZA0 190 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PROX1Q92786 737 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 FAM162AQ96A26 154 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TAMM41Q96BW9 452 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF524Q96C55 264 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 WDYHV1Q96HA8 205 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TPD52L3Q96J77 140 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RNF145Q96MT1 663 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NPAS1Q99742 590 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 THTPAQ9BU02 230 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TMEM185BQ9H7F4 350 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TMEM27Q9HBJ8 222 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 EXOSC3Q9NQT5 275 aaKnown RBP5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SERINC1Q9NRX5 453 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PNPLA3Q9NST1 481 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ACER3Q9NUN7 267 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TAS2R1Q9NYW7 299 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SELENONQ9NZV5 590 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ABCD2Q9UBJ2 740 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TINAGQ9UJW2 476 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 BAG5Q9UL15 447 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF835Q9Y2P0 537 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SH3GLB1Q9Y371 365 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ITPR1Q14643 2758 aa5.22□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DNAJC13O75165 2243 aa5.21□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GTF3C1Q12789 2109 aa5.21□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PCNX3Q9H6A9 2034 aa5.21□□□□□ -1.57
SCARNA6.1-201ENST00000516989 A0A1B0GUH1 482 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 GJE1A6NN92 205 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 H0Y3Z8 333 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 M0R3H8 397 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 EBAG9O00559 213 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 EFNA2O43921 213 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 WDR1O75083 606 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ATP5HO75947 161 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ZNF682O95780 498 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LGI1O95970 557 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SERPINA1P01009 418 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 IGHA1P01876 353 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 STSP08842 583 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TFPIP10646 304 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 PRG2P13727 222 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 GABRA1P14867 456 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 MALP21145 153 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ME2P23368 584 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CXCR1P25024 350 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 PSMA4P25789 261 aaKnown RBP5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ACVR2AP27037 513 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TACR3P29371 465 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SFTPDP35247 375 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CPOXP36551 454 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 APOBEC1P41238 236 aaKnown RBP5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SLC1A3P43003 542 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CA7P43166 264 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LHX2P50458 406 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 RASSF2P50749 326 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SUCLG1P53597 346 aaKnown RBP5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CLDN20P56880 219 aa5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 RPS3AP61247 264 aaKnown RBP5.21□□□□□ -1.58
SCARNA6.1-201ENST00000516989 NCALDP61601 193 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms