RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 PDK3Q15120 406 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 GUSBP1Q15486 140 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 OR7A5Q15622 319 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 ABLIM2Q6H8Q1 611 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 WDR88Q6ZMY6 472 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 FAM214BQ7L5A3 538 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 AQP12AQ8IXF9 295 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 ABHD3Q8WU67 409 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 C7orf34Q96L11 122 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 ZNF300Q96RE9 604 aaPredicted RBP10.63□□□□□ -0.71
SNF8-215ENST00000515572 PRSS27Q9BQR3 290 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 PTDSS2Q9BVG9 487 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 KLHL4Q9C0H6 718 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 PIGMQ9H3S5 423 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 ANKRD19PQ9H560 264 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 MAGIXQ9H6Y5 334 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 IL1RAPQ9NPH3 570 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 NDUFAF4Q9P032 175 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 EMC3Q9P0I2 261 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 KLHL13Q9P2N7 655 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 POMPQ9Y244 141 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 EMC9Q9Y3B6 208 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
SNF8-215ENST00000515572 IGHV3-15A0A0B4J1V0 119 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 TCRBV5S2A0A599 114 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 AQP7P3A6NL99 342 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 FTCDNL1E5RQL4 147 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 GPR171O14626 319 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 FFAR1O14842 300 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 TNFSF13O75888 250 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 FABP3P05413 133 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 RNF224P0DH78 156 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 BMP5P22003 454 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 YAP1P46937 504 aaKnown RBP10.62□□□□□ -0.71
SNF8-215ENST00000515572 SMIM11AP58511 58 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 RASGEF1BQ0VAM2 473 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 FOXF2Q12947 444 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 FLOT2Q14254 428 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 TMEM201Q5SNT2 666 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 OTUD3Q5T2D3 398 aaPredicted RBP10.62□□□□□ -0.71
SNF8-215ENST00000515572 ASRGL1Q7L266 308 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 PIWIL3Q7Z3Z3 882 aaKnown RBP10.62□□□□□ -0.71
SNF8-215ENST00000515572 LIX1LQ8IVB5 337 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 CNEP1R1Q8N9A8 125 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 OR6K3Q8NGY3 331 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 TAAR8Q969N4 342 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 DNAJA3Q96EY1 480 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 LRRC46Q96FV0 321 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 ZNF347Q96SE7 839 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 PSD2Q9BQI7 771 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 ASPNQ9BXN1 380 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 BCO1Q9HAY6 547 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 SLC7A8Q9UHI5 535 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 B3GALT5Q9Y2C3 310 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 MED31Q9Y3C7 131 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 CORINQ9Y5Q5 1042 aa10.62□□□□□ -0.71
SNF8-215ENST00000515572 KLF2Q9Y5W3 355 aaPredicted RBP10.62□□□□□ -0.71
SNF8-215ENST00000515572 IGKV3D-15A0A087WSY6 115 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 A0A1W2PRQ8 180 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 ZNF724A8MTY0 619 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 hCG_2039718K7EN88 272 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 PRSS23O95084 383 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 AKR7A3O95154 331 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 VAMP5O95183 116 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 MT-ND1P03886 318 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 H1F0P07305 194 aaKnown RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 YES1P07947 543 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 UMPSP11172 480 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 AGTR1P30556 359 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 KIR2DL2P43627 348 aaPredicted RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 SLC16A1P53985 500 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 CHRNB3Q05901 458 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 GABPB1Q06547 395 aaPredicted RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 DGCR6Q14129 220 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 FAM98BQ52LJ0 330 aaKnown RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 TMEM225Q6GV28 225 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 MAMDC2Q7Z304 686 aaPredicted RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 TSEN54Q7Z6J9 526 aaKnown RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 P3H2Q8IVL5 708 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 ZDHHC21Q8IVQ6 265 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 NKAIN4Q8IVV8 208 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 RNF113BQ8IZP6 322 aaKnown RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 C10orf53Q8N6V4 93 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 TMEM99Q8N816 258 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 SCAIQ8N9R8 606 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 ADPRHL1Q8NDY3 354 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 PIK3C3Q8NEB9 887 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 TMEM255BQ8WV15 326 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 TMEM239Q8WW34 195 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 ACOT11Q8WXI4 607 aaPredicted RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 SLC25A36Q96CQ1 311 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 SEPHS2Q99611 448 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 PIP5K1AQ99755 562 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 SF3B5Q9BWJ5 86 aaKnown RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 NMNAT1Q9HAN9 279 aaPredicted RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 KCNJ16Q9NPI9 418 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 MAN2C1Q9NTJ4 1040 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 C6orf203Q9P0P8 240 aaPredicted RBP10.61□□□□□ -0.71
SNF8-215ENST00000515572 RHCGQ9UBD6 479 aa10.61□□□□□ -0.71
SNF8-215ENST00000515572 RASD1Q9Y272 281 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms