RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PLEK2Q9NYT0 353 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF337Q9Y3M9 751 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 C20orf202A1L168 122 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ELK1P19419 428 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 TACR1P25103 407 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 OR1Q1Q15612 314 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 RNF175Q8N4F7 328 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 MED20Q9H944 212 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 CLN5O75503 358 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 HCCSP53701 268 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 ILKQ13418 452 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 DEFB110Q30KQ9 67 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 CCNJQ5T5M9 372 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 STEAP1BQ6NZ63 245 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 RBMS3Q6XE24 437 aaKnown RBP12.39□□□□□ -0.43
TCOF1-214ENST00000515035 CLEC14AQ86T13 490 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 LMF2Q9BU23 707 aaKnown RBP12.39□□□□□ -0.43
TCOF1-214ENST00000515035 STRADBQ9C0K7 418 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 RNF32Q9H0A6 362 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 C1orf123Q9NWV4 160 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 SNX11Q9Y5W9 270 aa12.39□□□□□ -0.43
TCOF1-214ENST00000515035 SFTPDP35247 375 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TNFRSF17Q02223 184 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF74Q16587 644 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 MPEG1Q2M385 716 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 AARDQ4LEZ3 155 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TMUB2Q71RG4 321 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 SLC39A13Q96H72 371 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 C10orf90Q96M02 699 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 FOXN4Q96NZ1 517 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 OR7D2Q96RA2 312 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ARNT2Q9HBZ2 717 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 NOX4Q9NPH5 578 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 MYO18AQ92614 2054 aaKnown RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 CEBPZOSA8MTT3 80 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 B4DXG7 233 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF888P0CJ79 500 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 NTSR1P30989 418 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 RPS19P39019 145 aaKnown RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 CCR9P51686 369 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 EFNA3P52797 238 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 BAK1Q16611 211 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 HSD17B11Q8NBQ5 300 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 OR13C2Q8NGS9 318 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 MYADMQ96S97 322 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF443Q9Y2A4 671 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 LILRB3O75022 631 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ATP1B1P05026 303 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 KITLGP21583 273 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 MFGE8Q08431 387 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 MRPL21Q7Z2W9 205 aaKnown RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM106AQ96A25 262 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TXN2Q99757 166 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 CR2P20023 1033 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 OR52W1Q6IF63 320 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 NDUFAF7Q7L592 441 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 BAGE2Q86Y30 109 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM151BQ8IW70 566 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 OR13C9Q8NGT0 318 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 GCDHQ92947 438 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TSACCQ96A04 125 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-214ENST00000515035 RNF170Q96K19 258 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 UBXN10Q96LJ8 280 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 LPAR4Q99677 370 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 ADAM19Q9H013 955 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 OR10A5Q9H207 317 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 OR10A2Q9H208 303 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 PDLIM7Q9NR12 457 aa12.38□□□□□ -0.43
TCOF1-214ENST00000515035 TRDV1A0A1B0GX56 115 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 TK1P04183 234 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 OPRD1P41143 372 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 SERTAD2Q14140 314 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 CNN3Q15417 329 aaKnown RBP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 RPE65Q16518 533 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 GDPD3Q7L5L3 318 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 CPNE4Q96A23 557 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 DAZAP1Q96EP5 407 aaKnown RBP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 APOA2P02652 100 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 ADRB1P08588 477 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 CPT2P23786 658 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 CCR7P32248 378 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 C17orf107Q6ZR85 190 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms