RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ADPRHL2Q9NX46 363 aa11.67□□□□□ -0.54
PFDN1-206ENST00000514611 NKIRAS1Q9NYS0 192 aa11.67□□□□□ -0.54
PFDN1-206ENST00000514611 CALML5Q9NZT1 146 aa11.67□□□□□ -0.54
PFDN1-206ENST00000514611 DCTN4Q9UJW0 460 aa11.67□□□□□ -0.54
PFDN1-206ENST00000514611 MGAT4BQ9UQ53 548 aa11.67□□□□□ -0.54
PFDN1-206ENST00000514611 HIVEP2P31629 2446 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 UBDO15205 165 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 CRLF1O75462 422 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 CDH2P19022 906 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-206ENST00000514611 MPGP29372 298 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 FABP6P51161 128 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 POLR2JP52435 117 aaKnown RBP11.66□□□□□ -0.54
PFDN1-206ENST00000514611 MAP2K6P52564 334 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 SLC18A1P54219 525 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 HOXC5Q00444 222 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 NRF1Q16656 503 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 HIKESHIQ53FT3 197 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 SLC2A7Q6PXP3 512 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 MSANTD1Q6ZTZ1 278 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 AAED1Q7RTV5 226 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 C1orf162Q8NEQ5 155 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-206ENST00000514611 MAL2Q969L2 176 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 C3orf49Q96BT1 292 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 ITCHQ96J02 903 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 ALKBH3Q96Q83 286 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-206ENST00000514611 RMND5AQ9H871 391 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 BARX1Q9HBU1 254 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-206ENST00000514611 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 PARPBPQ9NWS1 579 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 AMDHD2Q9Y303 409 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 CSPG4Q6UVK1 2322 aa11.66□□□□□ -0.54
PFDN1-206ENST00000514611 A0A096LNT2 108 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 A8MVM7 634 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 TMEM229AB2RXF0 380 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 ATP6V1G2-DDX39BF2Z307 99 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 KLF11O14901 512 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 TP53P04637 393 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 HOXB9P17482 250 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 NCF2P19878 526 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 SELENOPP49908 381 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 COPZ1P61923 177 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 LARS2Q15031 903 aaKnown RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 MIER2Q8N344 545 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 ZNF525Q8N782 197 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 GTF2H4Q92759 462 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 SF3B5Q9BWJ5 86 aaKnown RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 SPATA9Q9BWV2 254 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 TAPBPLQ9BX59 468 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
PFDN1-206ENST00000514611 PCDHB14Q9Y5E9 798 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 ATP23Q9Y6H3 246 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 USH1CQ9Y6N9 552 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 CADP27708 2225 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 SVEP1Q4LDE5 3571 aa11.65□□□□□ -0.54
PFDN1-206ENST00000514611 CR1P17927 2039 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 A0A0G2JPF8 293 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 FAM234BA2RU67 622 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 HNRNPCL3B7ZW38 293 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 CD5LO43866 347 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 GPRIN2O60269 458 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
PFDN1-206ENST00000514611 NPIPB7O75200 414 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 LGI1O95970 557 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 HNRNPCL4P0DMR1 293 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 TGFBR3Q03167 851 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 RGNQ15493 299 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 ZNF311Q5JNZ3 666 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 C1orf140Q5VVS0 124 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 PRAMEF8Q5VWM4 474 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 PRAMEF7Q5VXH5 474 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 ZNF544Q6NX49 715 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 KLHL24Q6TFL4 600 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 CREB3L2Q70SY1 520 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 LINGO2Q7L985 606 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 COMTD1Q86VU5 262 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 DEPDC4Q8N2C3 294 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 C10orf111Q8N326 155 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 POMGNT2Q8NAT1 580 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 PTDSS2Q9BVG9 487 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-206ENST00000514611 CACYBPQ9HB71 228 aaKnown RBP11.64□□□□□ -0.55
PFDN1-206ENST00000514611 SEC14L4Q9UDX3 406 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 TLN2Q9Y4G6 2542 aa11.64□□□□□ -0.55
PFDN1-206ENST00000514611 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 FTCDNL1E5RQL4 147 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 CLIC1O00299 241 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 LY6HO94772 140 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 AHSA1O95433 338 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 PNMTP11086 282 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 RPS5P46782 204 aaKnown RBP11.63□□□□□ -0.55
PFDN1-206ENST00000514611 PRPS1P60891 318 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 EGR4Q05215 589 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 TBRG1Q3YBR2 411 aa11.63□□□□□ -0.55
PFDN1-206ENST00000514611 BEND6Q5SZJ8 279 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-206ENST00000514611 TMEM225Q6GV28 225 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms