RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TRAPPC13A5PLN9 417 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 GMNNO75496 209 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 LYPD3O95274 346 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 THY1P04216 161 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 CALB2P22676 271 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 MSX2P35548 267 aaPredicted RBP12.41□□□□□ -0.42
USP46-209ENST00000514536 CPOXP36551 454 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 FAM27E3Q08E93 113 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 EXOC3L2Q2M3D2 409 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 OTUD3Q5T2D3 398 aaPredicted RBP12.41□□□□□ -0.42
USP46-209ENST00000514536 SWT1Q5T5J6 900 aaKnown RBP12.41□□□□□ -0.42
USP46-209ENST00000514536 ABLIM2Q6H8Q1 611 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 PAQR6Q6TCH4 344 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 LINC00114Q6XXX2 140 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 FKBP9P1Q75LS8 142 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 KIF18BQ86Y91 864 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 RBM15BQ8NDT2 890 aaKnown RBP12.41□□□□□ -0.42
USP46-209ENST00000514536 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 TAAR8Q969N4 342 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 TACO1Q9BSH4 297 aaKnown RBP12.41□□□□□ -0.42
USP46-209ENST00000514536 PTDSS2Q9BVG9 487 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 PCDHAC1Q9H158 963 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
USP46-209ENST00000514536 ZNF716A6NP11 495 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 ZNF724A8MTY0 619 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 CHP2O43745 196 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 HSD17B1P14061 328 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 CBLP22681 906 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 TAS2R41P59536 307 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 FOXD4Q12950 439 aaPredicted RBP12.4□□□□□ -0.42
USP46-209ENST00000514536 PDK3Q15120 406 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 C5orf46Q6UWT4 87 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
USP46-209ENST00000514536 TRAV36DV7A0A075B6V5 113 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 FTCDNL1E5RQL4 147 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 OR2T1O43869 369 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 CD79BP40259 229 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 YAP1P46937 504 aaKnown RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 PIN1Q13526 163 aaPredicted RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 IFI44LQ53G44 452 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 TMEM225Q6GV28 225 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 TTC33Q6PID6 262 aaPredicted RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 GALNT5Q7Z7M9 940 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 STK32CQ86UX6 486 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 SLC41A3Q96GZ6 507 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 HSH2DQ96JZ2 352 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 EPYCQ99645 322 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 TMEM43Q9BTV4 400 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 AMBRA1Q9C0C7 1298 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 RIMS3Q9UJD0 308 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 RPS6KA6Q9UK32 745 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 SNX13Q9Y5W8 968 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 HCFC1P51610 2035 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 AQP7P3A6NL99 342 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 GPR171O14626 319 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 UBOX5O94941 541 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 POU2F1P14859 743 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 GTF2E2P29084 291 aaKnown RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 NTF4P34130 210 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 P2RY4P51582 365 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 SLC16A1P53985 500 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 LTBQ06643 244 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 SLC17A1Q14916 467 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 FAM69AQ5T7M9 428 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 BEND4Q6ZU67 534 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 ZNF295-AS1Q8N0V1 137 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 MPP4Q96JB8 637 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 GORASP2Q9H8Y8 452 aa12.39□□□□□ -0.43
USP46-209ENST00000514536 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 C6orf203Q9P0P8 240 aaPredicted RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 NOSIPQ9Y314 301 aaKnown RBP12.39□□□□□ -0.43
USP46-209ENST00000514536 ITPR2Q14571 2701 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 TUBAL3A6NHL2 446 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 OR5F1O95221 314 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 IFNW1P05000 195 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 EDNRAP25101 427 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 GRPRP30550 384 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 PEX19P40855 299 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 SORDQ00796 357 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 FXNQ16595 210 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 NKAIN4Q8IVV8 208 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 ZNF100Q8IYN0 542 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 KDM8Q8N371 416 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 GEMIN6Q8WXD5 167 aaKnown RBP12.38□□□□□ -0.43
USP46-209ENST00000514536 PRSS27Q9BQR3 290 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 KLHL4Q9C0H6 718 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
USP46-209ENST00000514536 POLR2J3Q9H1A7 115 aaKnown RBP12.38□□□□□ -0.43
USP46-209ENST00000514536 TAS2R1Q9NYW7 299 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms