RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 XKR7Q5GH72 579 aa5.47□□□□□ -1.53
NUP54-215ENST00000514313 SAMD4BQ5PRF9 694 aaKnown RBP5.47□□□□□ -1.53
NUP54-215ENST00000514313 ZNF658Q5TYW1 1059 aaPredicted RBP5.47□□□□□ -1.53
NUP54-215ENST00000514313 CARD17Q5XLA6 110 aa5.47□□□□□ -1.53
NUP54-215ENST00000514313 OLFML2AQ68BL7 652 aa5.47□□□□□ -1.53
NUP54-215ENST00000514313 FTMTQ8N4E7 242 aa5.47□□□□□ -1.53
NUP54-215ENST00000514313 ZNF525Q8N782 197 aa5.47□□□□□ -1.53
NUP54-215ENST00000514313 SPATA4Q8NEY3 305 aa5.47□□□□□ -1.53
NUP54-215ENST00000514313 SUDS3Q9H7L9 328 aaPredicted RBP5.47□□□□□ -1.53
NUP54-215ENST00000514313 PSMC3IPQ9P2W1 217 aaPredicted RBP5.47□□□□□ -1.53
NUP54-215ENST00000514313 ZNF107Q9UII5 783 aaPredicted RBP5.47□□□□□ -1.53
NUP54-215ENST00000514313 COL5A2P05997 1499 aaPredicted RBP5.46□□□□□ -1.53
NUP54-215ENST00000514313 A0A075B6Q4 140 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 OR5B21A6NL26 309 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 TOM1O60784 492 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 LGI1O95970 557 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 IGHV3-23P01764 117 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 SEMG1P04279 462 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 CT62P0C5K7 136 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 TNNI1P19237 187 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 ATP6V1B2P21281 511 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 KITLGP21583 273 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 IL12AP29459 219 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 PRKAR2BP31323 418 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 MICBQ29980 383 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 UTF1Q5T230 341 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 WDR74Q6RFH5 385 aaPredicted RBP5.46□□□□□ -1.54
NUP54-215ENST00000514313 UNQ9370/PRO34162Q6UXP9 181 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 ZNF589Q86UQ0 364 aaPredicted RBP5.46□□□□□ -1.54
NUP54-215ENST00000514313 TPRX1Q8N7U7 411 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 SETD7Q8WTS6 366 aaKnown RBP5.46□□□□□ -1.54
NUP54-215ENST00000514313 PAGE5Q96GU1 130 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 ZNF702PQ9H963 129 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 FOLH1BQ9HBA9 442 aa5.46□□□□□ -1.54
NUP54-215ENST00000514313 IGHV1OR21-1A0A087WYE8 117 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 TCP11X1B4DZS4 312 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 C1orf105O95561 183 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 RFC4P35249 363 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 KPNA2P52292 529 aaKnown RBP5.45□□□□□ -1.54
NUP54-215ENST00000514313 RPS8P62241 208 aaKnown RBP5.45□□□□□ -1.54
NUP54-215ENST00000514313 DGUOKQ16854 277 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 PPP1R27Q86WC6 154 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 CDC20BQ86Y33 519 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 MARCH9Q86YJ5 346 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 RDH10Q8IZV5 341 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 SLC39A11Q8N1S5 342 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 CD177Q8N6Q3 437 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 ACOT4Q8N9L9 421 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 OR10H4Q8NGA5 316 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 OR4F6Q8NGB9 312 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 MRAPQ8TCY5 172 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 NEIL2Q969S2 332 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 CMTM7Q96FZ5 175 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 TECTBQ96PL2 329 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 MBOAT4Q96T53 435 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 CNPY3Q9BT09 278 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 ANKRA2Q9H9E1 313 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 ISG20L2Q9H9L3 353 aaKnown RBP5.45□□□□□ -1.54
NUP54-215ENST00000514313 ZNF275Q9NSD4 429 aaPredicted RBP5.45□□□□□ -1.54
NUP54-215ENST00000514313 MOKQ9UQ07 419 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 TTC21BQ7Z4L5 1316 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 SH3TC1Q8TE82 1336 aa5.45□□□□□ -1.54
NUP54-215ENST00000514313 LOC110117498-PIK3R3F6TDL0 507 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 DFNA5O60443 496 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 SERF1AO75920 110 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 OR7A10O76100 309 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 KLK7P49862 253 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 PARP15Q460N3 678 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 PRR30Q53SZ7 412 aaPredicted RBP5.44□□□□□ -1.54
NUP54-215ENST00000514313 BAIAP2L2Q6UXY1 529 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 LRRC74BQ6ZQY2 392 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 GDPD3Q7L5L3 318 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 ERI1Q8IV48 349 aaKnown RBP5.44□□□□□ -1.54
NUP54-215ENST00000514313 FBXO16Q8IX29 292 aaPredicted RBP5.44□□□□□ -1.54
NUP54-215ENST00000514313 PANX1Q96RD7 426 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 CENPKQ9BS16 269 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 NEK6Q9HC98 313 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 DCDC2Q9UHG0 476 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 STARD10Q9Y365 291 aa5.44□□□□□ -1.54
NUP54-215ENST00000514313 PSTPIP1O43586 416 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 HCRTR1O43613 425 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 IGHV3-48P01763 117 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 KRT14P02533 472 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 SERPIND1P05546 499 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 FGF4P08620 206 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 FDFT1P37268 417 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 CDH6P55285 790 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 KCNJ2P63252 427 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 GNMTQ14749 295 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 C1orf185Q5T7R7 199 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 TFAP2EQ6VUC0 442 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 HSD17B13Q7Z5P4 300 aaPredicted RBP5.43□□□□□ -1.54
NUP54-215ENST00000514313 MYPOPQ86VE0 399 aaPredicted RBP5.43□□□□□ -1.54
NUP54-215ENST00000514313 SLC26A11Q86WA9 606 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 VRK2Q86Y07 508 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 CEP112Q8N8E3 955 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 OR52I1Q8NGK6 324 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 ELMO1Q92556 727 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 RIOK1Q9BRS2 568 aaKnown RBP5.43□□□□□ -1.54
NUP54-215ENST00000514313 RNF167Q9H6Y7 350 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms