RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 SLC5A7Q9GZV3 580 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 NUBP2Q9Y5Y2 271 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 TMEM269A0A1B0GVZ9 245 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 F5H5P2 479 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 AK1P00568 194 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 UGT2B7P16662 529 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 PSMB1P20618 241 aaKnown RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 EPHA5P54756 1037 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 HERV-K104P61576 105 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 IL13RA1P78552 427 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 DGCR2P98153 550 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 SLC48A1Q6P1K1 146 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 SSX6Q7RTT6 188 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 ABHD12BQ7Z5M8 362 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 SLC35A4Q96G79 324 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 AKIP1Q9NQ31 210 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 OR5K4A6NMS3 321 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 ZAR1LA6NP61 321 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 ACOT7O00154 380 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 IL33O95760 270 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 UBL4AP11441 157 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 UGT2B10P36537 528 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 HTR3AP46098 478 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 CSNK2A1P68400 391 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 GPR176Q14439 515 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 FAM26DQ5JW98 314 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 TCEAL6Q6IPX3 200 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 METAP1DQ6UB28 335 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 USP51Q70EK9 711 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 CSNK2A3Q8NEV1 391 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 OR1E3Q8WZA6 343 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 CNRIP1Q96F85 164 aaPredicted RBP12.1□□□□□ -0.47
PRDM16-208ENST00000514189 TXNDC15Q96J42 360 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 PKMYT1Q99640 499 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 MAP3K3Q99759 626 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 REV1Q9UBZ9 1251 aa12.1□□□□□ -0.47
PRDM16-208ENST00000514189 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 NPIPA2E9PIF3 369 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 NPIPA3F8WFD2 350 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
PRDM16-208ENST00000514189 MAGEB1P43366 347 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 TIAL1Q01085 375 aaKnown RBP eCLIP12.09□□□□□ -0.473e-9■■■■□ 26.4
PRDM16-208ENST00000514189 GPR50Q13585 617 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 AGERQ15109 404 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 SLC9A3R2Q15599 337 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 C9orf135Q5VTT2 229 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 MBOAT2Q6ZWT7 520 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 BATF2Q8N1L9 274 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 ZSCAN1Q8NBB4 408 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 OR7G2Q8NG99 324 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 DCUN1D4Q92564 292 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 YIPF6Q96EC8 236 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 ZNF442Q9H7R0 627 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 TRABD2BA6NFA1 517 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 F10P00742 488 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
PRDM16-208ENST00000514189 ANXA7P20073 488 aaKnown RBP12.09□□□□□ -0.47
PRDM16-208ENST00000514189 NPR2P20594 1047 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 CFL1P23528 166 aaKnown RBP12.09□□□□□ -0.47
PRDM16-208ENST00000514189 TACR3P29371 465 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 KIR2DS3Q14952 304 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 CDK10Q15131 360 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 CLDN22Q8N7P3 220 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 SPPL3Q8TCT6 385 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 LPAR4Q99677 370 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 CBLCQ9ULV8 474 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 IGHV3-20A0A0C4DH32 117 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 ZNF28P17035 718 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 ZNF43P17038 809 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 RAB2AP61019 212 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 EIF5AP63241 154 aaKnown RBP12.09□□□□□ -0.47
PRDM16-208ENST00000514189 TCTE1Q5JU00 501 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 SAXO2Q658L1 398 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 HBMQ6B0K9 141 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 ARSKQ6UWY0 536 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 PAQR8Q8TEZ7 354 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 MS4A6EQ96DS6 147 aa12.09□□□□□ -0.47
PRDM16-208ENST00000514189 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.47
PRDM16-208ENST00000514189 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.47
PRDM16-208ENST00000514189 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 UPK1AO00322 258 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 NUDT21O43809 227 aaKnown RBP12.08□□□□□ -0.48
PRDM16-208ENST00000514189 MTRF1O75570 445 aaKnown RBP12.08□□□□□ -0.48
PRDM16-208ENST00000514189 LGI1O95970 557 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 CSF3P09919 207 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 NFATC4Q14934 902 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 METRNLQ641Q3 311 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 OR10K2Q6IF99 312 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 TSSK4Q6SA08 328 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 BPIFB2Q8N4F0 458 aa12.08□□□□□ -0.48
PRDM16-208ENST00000514189 SFXN5Q8TD22 340 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms