RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 UMPSP11172 480 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 COX6B1P14854 86 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 BNIP1Q12981 228 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 C1DQ13901 141 aaKnown RBP12.96□□□□□ -0.33
SNF8-212ENST00000514089 TRIM25Q14258 630 aaKnown RBP12.96□□□□□ -0.33
SNF8-212ENST00000514089 FAM69AQ5T7M9 428 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 CCDC121Q6ZUS5 278 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 TMEM99Q8N816 258 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 ZNF610Q8N9Z0 462 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
SNF8-212ENST00000514089 TAAR8Q969N4 342 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 HS6ST2Q96MM7 605 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 TMEM43Q9BTV4 400 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 KLHL4Q9C0H6 718 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 OPN3Q9H1Y3 402 aaPredicted RBP12.96□□□□□ -0.33
SNF8-212ENST00000514089 MUC13Q9H3R2 512 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 ACTR3BQ9P1U1 418 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 RHCGQ9UBD6 479 aa12.96□□□□□ -0.33
SNF8-212ENST00000514089 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.33
SNF8-212ENST00000514089 NOSIPQ9Y314 301 aaKnown RBP12.96□□□□□ -0.33
SNF8-212ENST00000514089 EXPH5Q8NEV8 1989 aa12.96□□□□□ -0.34
SNF8-212ENST00000514089 MYO18BQ8IUG5 2567 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 UBR5O95071 2799 aaPredicted RBP12.95□□□□□ -0.34
SNF8-212ENST00000514089 hCG_2039718K7EN88 272 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 EBAG9O00559 213 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
SNF8-212ENST00000514089 VAMP5O95183 116 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 AHCYP23526 432 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 COL8A1P27658 744 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 AGTR1P30556 359 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 EGR4Q05215 589 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 PMS2P3Q13401 168 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 TRAM2Q15035 370 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 H1FNTQ75WM6 255 aaPredicted RBP12.95□□□□□ -0.34
SNF8-212ENST00000514089 CDK20Q8IZL9 346 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 UBE2J2Q8N2K1 259 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 RELL2Q8NC24 303 aaPredicted RBP12.95□□□□□ -0.34
SNF8-212ENST00000514089 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 POP5Q969H6 163 aaKnown RBP12.95□□□□□ -0.34
SNF8-212ENST00000514089 CLPTM1LQ96KA5 538 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 PSD2Q9BQI7 771 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 PLSCR4Q9NRQ2 329 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 PARPBPQ9NWS1 579 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 RASD1Q9Y272 281 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 MED31Q9Y3C7 131 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 CORINQ9Y5Q5 1042 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 ENPP4Q9Y6X5 453 aa12.95□□□□□ -0.34
SNF8-212ENST00000514089 FASNP49327 2511 aaKnown RBP12.95□□□□□ -0.34
SNF8-212ENST00000514089 ZNF724A8MTY0 619 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 A8MXE2 369 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 J3KTA2 159 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 NPIPB7O75200 414 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 KRT33AO76009 404 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 CH25HO95992 272 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 CD8BP10966 210 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 POU2F1P14859 743 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 ZNF43P17038 809 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 KLK2P20151 261 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
SNF8-212ENST00000514089 GRPRP30550 384 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 PEX19P40855 299 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 RBM34P42696 430 aaKnown RBP12.94□□□□□ -0.34
SNF8-212ENST00000514089 PDK3Q15120 406 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 MTX3Q5HYI7 312 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 ZNF730Q6ZMV8 503 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 MEX3BQ6ZN04 569 aaKnown RBP12.94□□□□□ -0.34
SNF8-212ENST00000514089 BEND4Q6ZU67 534 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 ZNF300Q96RE9 604 aaPredicted RBP12.94□□□□□ -0.34
SNF8-212ENST00000514089 SEPHS2Q99611 448 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 SF3B5Q9BWJ5 86 aaKnown RBP12.94□□□□□ -0.34
SNF8-212ENST00000514089 SLC19A3Q9BZV2 496 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 BCO1Q9HAY6 547 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 NANSQ9NR45 359 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 B3GALT5Q9Y2C3 310 aa12.94□□□□□ -0.34
SNF8-212ENST00000514089 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 AQP7P3A6NL99 342 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 M0R082 166 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 MT-ATP6P00846 226 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 FABP3P05413 133 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 RHCEP18577 417 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 SMIM11AP58511 58 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 H3F3AP84243 136 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 TRAP1Q12931 704 aaKnown RBP12.93□□□□□ -0.34
SNF8-212ENST00000514089 FXNQ16595 210 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 FAM98BQ52LJ0 330 aaKnown RBP12.93□□□□□ -0.34
SNF8-212ENST00000514089 FGD3Q5JSP0 725 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 CASP12Q6UXS9 341 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 NUFIP2Q7Z417 695 aaKnown RBP12.93□□□□□ -0.34
SNF8-212ENST00000514089 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
SNF8-212ENST00000514089 NKAIN4Q8IVV8 208 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 KDM8Q8N371 416 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 OR9K2Q8NGE7 335 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 OR6S1Q8NH40 331 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 ZNF417Q8TAU3 575 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 TMEM255BQ8WV15 326 aa12.93□□□□□ -0.34
SNF8-212ENST00000514089 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms