RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TMEM216Q9P0N5 145 aa9.01□□□□□ -0.97
CLDND1-227ENST00000513452 MKLN1Q9UL63 735 aa9.01□□□□□ -0.97
CLDND1-227ENST00000513452 UTP11Q9Y3A2 253 aaKnown RBP9.01□□□□□ -0.97
CLDND1-227ENST00000513452 CCL27Q9Y4X3 112 aa9.01□□□□□ -0.97
CLDND1-227ENST00000513452 ZSCAN12O43309 604 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 RP2O75695 350 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 UGT2B17O75795 530 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 NCR1O76036 304 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 URI1O94763 535 aaPredicted RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 FSHBP01225 129 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 GSNP06396 782 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 GSTA1P08263 222 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 CBR1P16152 277 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 FKBP2P26885 142 aaKnown RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 SELENOPP49908 381 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 SEC24CP53992 1094 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 RPS26P62854 115 aaKnown RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 RPL38P63173 70 aaKnown RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 MVKQ03426 396 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 C2orf54Q08AI8 447 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 AVPI1Q5T686 147 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 REP15Q6BDI9 236 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 EMBQ6PCB8 327 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 LINGO2Q7L985 606 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 SLC22A9Q8IVM8 553 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 TMEM99Q8N816 258 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 FAM71CQ8NEG0 241 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 OR5AK3PQ8NH89 298 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 MAGEE2Q8TD90 523 aaPredicted RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 LRRC58Q96CX6 371 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 DDIT4LQ96D03 193 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 RAB39BQ96DA2 213 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 ZNF317Q96PQ6 595 aaPredicted RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 NAPGQ99747 312 aaPredicted RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 ZNF416Q9BWM5 594 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 RAB17Q9H0T7 212 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 MS4A5Q9H3V2 200 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 SERHL2Q9H4I8 314 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 C7orf69Q9H7B7 122 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 ZMAT3Q9HA38 289 aaKnown RBP9□□□□□ -0.97
CLDND1-227ENST00000513452 CRLF2Q9HC73 371 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 TNFRSF12AQ9NP84 129 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 NINJ2Q9NZG7 142 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 OPN4Q9UHM6 478 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 PCDHGB4Q9UN71 923 aa9□□□□□ -0.97
CLDND1-227ENST00000513452 TMED7-TICAM2A0A0A6YYA0 188 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 TMEM72A0PK05 275 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 ZC3H12DA2A288 527 aaKnown RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 ZNF503-AS2A6NEH8 195 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 POC1B-GALNT4F8VUJ3 575 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 FCMRO60667 390 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 DEAF1O75398 565 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 STX11O75558 287 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 AKR7A3O95154 331 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 BCKDHAP12694 445 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 MDKP21741 143 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 PRPH2P23942 346 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 PGM1P36871 562 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 HPCAL1P37235 193 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 SRSF4Q08170 494 aaKnown RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 BAMBIQ13145 260 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 MAPK14Q16539 360 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 CLEC6AQ6EIG7 209 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 LEG1Q6P5S2 330 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 ZNF771Q7L3S4 317 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 DOK3Q7L591 496 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 R3HCC1LQ7Z5L2 792 aaKnown RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 HMGN2P46Q86SG4 172 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 MDP1Q86V88 176 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 C1QL4Q86Z23 238 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 OR7A2PQ8NGA2 310 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 OR2T11Q8NH01 316 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 DCAKDQ8WVC6 231 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 MTERF3Q96E29 417 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 METTL2AQ96IZ6 378 aaKnown RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 FCRL1Q96LA6 429 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 C1orf147Q96MC9 270 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 SF3B5Q9BWJ5 86 aaKnown RBP8.99□□□□□ -0.97
CLDND1-227ENST00000513452 TMED7Q9Y3B3 224 aa8.99□□□□□ -0.97
CLDND1-227ENST00000513452 AQP7P3A6NL99 342 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 AP3D1O14617 1153 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 SCAMP2O15127 329 aaKnown RBP8.98□□□□□ -0.97
CLDND1-227ENST00000513452 CDC14BO60729 498 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 UPK3AO75631 287 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 C6orf47O95873 294 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 NAT2P11245 290 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 LAMP1P11279 417 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 NR4A1P22736 598 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 GCH1P30793 250 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 SOAT1P35610 550 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 ARR3P36575 388 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 CAPZA2P47755 286 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 IDH2P48735 452 aaKnown RBP8.98□□□□□ -0.97
CLDND1-227ENST00000513452 EVX1P49640 407 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 POLR2HP52434 150 aaKnown RBP8.98□□□□□ -0.97
CLDND1-227ENST00000513452 SH3BGRP55822 239 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-227ENST00000513452 GNG11P61952 73 aa8.98□□□□□ -0.97
CLDND1-227ENST00000513452 MRPS11P82912 194 aaKnown RBP8.98□□□□□ -0.97
CLDND1-227ENST00000513452 ARF1P84077 181 aaKnown RBP8.98□□□□□ -0.97
CLDND1-227ENST00000513452 ROR2Q01974 943 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms