RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RABIFP47224 123 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 PPT1P50897 306 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 CLDN12P56749 244 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 RPS15AP62244 130 aaKnown RBP10.46□□□□□ -0.73
TCOF1-211ENST00000513346 BPIFB2Q8N4F0 458 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 OR2T4Q8NH00 348 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 SLC22A12Q96S37 553 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 CXXC1Q9P0U4 656 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-211ENST00000513346 SLC35A3Q9Y2D2 325 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 ARRDC5A6NEK1 342 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 AK1P00568 194 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 KLKB1P03952 638 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 MCCD1P59942 119 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-211ENST00000513346 CHRFAM7AQ494W8 412 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 GXYLT1Q4G148 440 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 IGSF11Q5DX21 431 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 ALG10BQ5I7T1 473 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 PDSS1Q5T2R2 415 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 SLC6A19Q695T7 634 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 BPIFA2Q96DR5 249 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 GAREM1Q9H706 876 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF281Q9Y2X9 895 aa10.46□□□□□ -0.73
TCOF1-211ENST00000513346 A0A1B0GUH1 482 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 ERVH48-1M5A8F1 160 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 FOXE1O00358 373 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 DPM1O60762 260 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 RDH16O75452 317 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 TRAPPC6AO75865 159 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 ITGA5P08648 1049 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 CXCL12P48061 93 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 SIRPAP78324 504 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 RNF212Q495C1 297 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 GPR139Q6DWJ6 353 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 ACSM5Q6NUN0 579 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 LEG1Q6P5S2 330 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 UNQ6126/PRO20091Q6UXV3 157 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 RELL2Q8NC24 303 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 UPRTQ96BW1 309 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 C14orf79Q96F83 325 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 PTGES2Q9H7Z7 377 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 MED20Q9H944 212 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 A4GALTQ9NPC4 353 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 EP300Q09472 2414 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 STMND1H3BQB6 276 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 CDK2AP1O14519 115 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 IMPA2O14732 288 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 PRICKLE3O43900 615 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 EIF4EP06730 217 aaKnown RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 BDKRB2P30411 391 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 COL13A1Q5TAT6 717 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 AADACL4Q5VUY2 407 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 SLC35F3Q8IY50 421 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 ST7LQ8TDW4 575 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 PHYHIPQ92561 330 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 ARHGAP9Q9BRR9 750 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 MAN2C1Q9NTJ4 1040 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 KLF15Q9UIH9 416 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 EXO1Q9UQ84 846 aaKnown RBP10.46□□□□□ -0.74
TCOF1-211ENST00000513346 IER3IP1Q9Y5U9 82 aa10.46□□□□□ -0.74
TCOF1-211ENST00000513346 A0A0B4J2A0 478 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 BET1O15155 118 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 PMS2P2O95744 297 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 HSD11B1P28845 292 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 RFX2P48378 723 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 AKR1C2P52895 323 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 AKR1C1Q04828 323 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SNTB1Q13884 538 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CCINQ13939 588 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 GBX1Q14549 363 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 MSRB3Q8IXL7 192 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SDR9C7Q8NEX9 313 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR10R2Q8NGX6 335 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 TERB2Q8NHR7 220 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 NEURL3Q96EH8 262 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 HIST1H2AAQ96QV6 131 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 ORAI3Q9BRQ5 295 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CPEB1Q9BZB8 566 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CCDC86Q9H6F5 360 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CXorf36Q9H7Y0 433 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 ZFP57Q9NU63 452 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 ACSS1Q9NUB1 689 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SHPKQ9UHJ6 478 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 RPH3AQ9Y2J0 694 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 MEIKINA0A087WXM9 373 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 ACOD1A6NK06 481 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 NUDT19A8MXV4 375 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CHATP28329 748 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 HLA-FP30511 346 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 RAD52P43351 418 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 LHX8Q68G74 356 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 FIGLAQ6QHK4 219 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 LIPIQ6XZB0 460 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 HSD11B1LQ7Z5J1 315 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 C9orf62Q8N4C0 152 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR5T3Q8NGG3 340 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR5B12Q96R08 314 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 URM1Q9BTM9 101 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms