RNA–Protein interactions for RNA: ENST00000511663.5

SH3BP2-220, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-220ENST00000511663 PDLIM1O00151 329 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 SDHDO14521 159 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 GPRIN2O60269 458 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 SLC22A3O75751 556 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 VAMP5O95183 116 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 C1QCP02747 245 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 CSF3P09919 207 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 GKN3PP0CG01 181 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 IDO1P14902 403 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 RPS4Y1P22090 263 aaKnown RBP16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 EPHA3P29320 983 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 IL12AP29459 219 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 PLAURQ03405 335 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 LOXL1Q08397 574 aaPredicted RBP16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 COX20Q5RI15 118 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 OR9K2Q8NGE7 335 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 HTRA1Q92743 480 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 AURKBQ96GD4 344 aaPredicted RBP16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 KCNK17Q96T54 332 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 WDR55Q9H6Y2 383 aaPredicted RBP16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 ADPRHL2Q9NX46 363 aa16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 THUMPD1Q9NXG2 353 aaKnown RBP16.88■□□□□ 0.29
SH3BP2-220ENST00000511663 CDHR4A6H8M9 788 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 LIPT2A6NK58 231 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 ELOA3DA6NLF2 546 aaPredicted RBP16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 A8MVM7 634 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 KITP10721 976 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 EFNA4P52798 201 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 UBE2NP61088 152 aaKnown RBP16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 MPP2Q14168 576 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 TMEM249Q2WGJ8 235 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 ELOA3BQ3SY89 546 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 ATG16L1Q676U5 607 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 B3GLCTQ6Y288 498 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 VRK2Q86Y07 508 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 ZNF525Q8N782 197 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 ELOA3Q8NG57 546 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 PROX1Q92786 737 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 OBP2BQ9NPH6 170 aa16.87■□□□□ 0.29
SH3BP2-220ENST00000511663 A0A096LPI6 279 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 OR6C65A6NJZ3 312 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 AQP7P3A6NL99 342 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 DSTNP60981 165 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 PDCD4Q53EL6 469 aaKnown RBP16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 CYB5R2Q6BCY4 276 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 FBXO17Q96EF6 278 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 ITCHQ96J02 903 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 ZNF385AQ96PM9 386 aaKnown RBP16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 BEX2Q9BXY8 128 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 CDC42EP3Q9UKI2 254 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 MOKQ9UQ07 419 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 IFT52Q9Y366 437 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 CR1P17927 2039 aa16.86■□□□□ 0.29
SH3BP2-220ENST00000511663 A0A0G2JPF8 293 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 HNRNPCL2B2RXH8 293 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 HNRNPCL3B7ZW38 293 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ZNF587BE7ETH6 402 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 KLF11O14901 512 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 HNRNPCL1O60812 293 aaKnown RBP16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 F12P00748 615 aaPredicted RBP16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 BCHEP06276 602 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 HNRNPCL4P0DMR1 293 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ETFAP13804 333 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 VLDLRP98155 873 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 BNIP2Q12982 314 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 C6orf52Q5T4I8 152 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ZNF836Q6ZNA1 936 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ZIC4Q8N9L1 334 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 TMEM158Q8WZ71 300 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ZBTB9Q96C00 473 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 MANSC1Q9H8J5 431 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 TPT1P8Q9HAU6 139 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 RASD1Q9Y272 281 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ZNF443Q9Y2A4 671 aaPredicted RBP16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 FKBP7Q9Y680 259 aa16.85■□□□□ 0.29
SH3BP2-220ENST00000511663 ABCA1O95477 2261 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 VSTM5A8MXK1 200 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 ATP6V1G2-DDX39BF2Z307 99 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 CRYAAP02489 173 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 TFPTP0C1Z6 253 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 ZCCHC18P0CG32 403 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 GTF2E2P29084 291 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 ACAA2P42765 397 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 SNRPD2P62316 118 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 HIKESHIQ53FT3 197 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 TNFAIP8L3Q5GJ75 292 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 C6orf10Q5SRN2 563 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 C1orf140Q5VVS0 124 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 PRAMEF8Q5VWM4 474 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 PRAMEF7Q5VXH5 474 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 MGARPQ8TDB4 240 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 C10orf105Q8TEF2 133 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 SLC38A5Q8WUX1 472 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 SPATA9Q9BWV2 254 aa16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 MOV10Q9HCE1 1003 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 HEATR1Q9H583 2144 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-220ENST00000511663 AHSA1O95433 338 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 FAM157CP0CG43 387 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms