RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CXCR2P25025 360 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CALCRP30988 508 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 SHMT2P34897 504 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CEBPDP49716 269 aaPredicted RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 SLC26A2P50443 739 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CRYBB1P53674 252 aaPredicted RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 PKNOX1P55347 436 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 RAP1BP61224 184 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 TGFBR3Q03167 851 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 GK3PQ14409 553 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 OXA1LQ15070 435 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 SCARA5Q6ZMJ2 495 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 RFLNAQ6ZTI6 216 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 ARCQ7LC44 396 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 ECHDC2Q86YB7 292 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CCDC50Q8IVM0 306 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CCDC65Q8IXS2 484 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 RDH10Q8IZV5 341 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 KIR2DL5AQ8N109 375 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 C14orf178Q8N769 122 aaPredicted RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 KIR2DL5BQ8NHK3 375 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 OR1E3Q8WZA6 343 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 UFD1Q92890 307 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 MARC2Q969Z3 335 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CMTM7Q96FZ5 175 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 PAGE5Q96GU1 130 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 CNDP1Q96KN2 507 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 TCEANC2Q96MN5 208 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 PANX2Q96RD6 677 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 FMO2Q99518 471 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 RAB34Q9BZG1 259 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 REEP4Q9H6H4 257 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 SUDS3Q9H7L9 328 aaPredicted RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 SGK2Q9HBY8 427 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 THUMPD1Q9NXG2 353 aaKnown RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 CD274Q9NZQ7 290 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 IGHV1OR21-1A0A087WYE8 117 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 NSG1A0A0A6YYJ2 146 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 UBXN8O00124 270 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 PALMO75781 387 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 CLDN9O95484 217 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 ATP1B2P14415 290 aaPredicted RBP2.18□□□□□ -2.06
CHD1-207ENST00000511628 OPRD1P41143 372 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 TPMTP51580 245 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 CAV2P51636 162 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 PLK1P53350 603 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 APOC4P55056 127 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 GNB2P62879 340 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 CSNK1G2P78368 415 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 HMGN5P82970 282 aaKnown RBP2.18□□□□□ -2.06
CHD1-207ENST00000511628 ARL6IP1Q15041 203 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 ZNF630Q2M218 657 aaPredicted RBP2.18□□□□□ -2.06
CHD1-207ENST00000511628 KLHL38Q2WGJ6 581 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 KCTD21Q4G0X4 260 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 FILIP1LQ4L180 1135 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 ZYG11AQ6WRX3 759 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 SLC26A11Q86WA9 606 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 VRK2Q86Y07 508 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 SLC22A9Q8IVM8 553 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 CDH26Q8IXH8 852 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 ZNF100Q8IYN0 542 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 FTMTQ8N4E7 242 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 ZNF740Q8NDX6 193 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 OR1L6Q8NGR2 347 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 SETD7Q8WTS6 366 aaKnown RBP2.18□□□□□ -2.06
CHD1-207ENST00000511628 RNF139Q8WU17 664 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.18□□□□□ -2.06
CHD1-207ENST00000511628 KCNA7Q96RP8 456 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 CLCC1Q96S66 551 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 TSG101Q99816 390 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 ARHGDIGQ99819 225 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 EBF4Q9BQW3 602 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 NICN1Q9BSH3 213 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 C20orf85Q9H1P6 137 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 NHEJ1Q9H9Q4 299 aaPredicted RBP2.18□□□□□ -2.06
CHD1-207ENST00000511628 FOLH1BQ9HBA9 442 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 TREM2Q9NZC2 230 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 SEC14L3Q9UDX4 400 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 DCDC2Q9UHG0 476 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 SLC7A8Q9UHI5 535 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 KCNIP3Q9Y2W7 256 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 IFT52Q9Y366 437 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 V9GY05 133 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 TNRQ92752 1358 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 PLEKHH1Q9ULM0 1364 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
CHD1-207ENST00000511628 IGLV3-22A0A075B6J6 115 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 IGHV3OR16-13A0A075B7E8 117 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 IQANK1A0A1B0GTG1 560 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 XKRY2A2RUG3 117 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 PSMB11A5LHX3 300 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 A8MXQ7 604 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 HAS3O00219 553 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 UGT1A9O60656 530 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 SUPT7LO94864 414 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 CT62P0C5K7 136 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 UQCRFS1P1P0C7P4 283 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 FUT3P21217 361 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 ANXA13P27216 316 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms