RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ZNF836Q6ZNA1 936 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 OR9K2Q8NGE7 335 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 HTRA1Q92743 480 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 AURKBQ96GD4 344 aaPredicted RBP13.5□□□□□ -0.25
TPM3-219ENST00000509409 SF3B5Q9BWJ5 86 aaKnown RBP13.5□□□□□ -0.25
TPM3-219ENST00000509409 TPT1P8Q9HAU6 139 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 SLC6A13Q9NSD5 602 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 ADPRHL2Q9NX46 363 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 ZIM2Q9NZV7 527 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 PRDM4Q9UKN5 801 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 ZNF443Q9Y2A4 671 aaPredicted RBP13.5□□□□□ -0.25
TPM3-219ENST00000509409 A0A0G2JPF8 293 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 A8MVM7 634 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 HNRNPCL2B2RXH8 293 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 HNRNPCL3B7ZW38 293 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 PDLIM1O00151 329 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 CD5LO43866 347 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 HNRNPCL1O60812 293 aaKnown RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 TFPTP0C1Z6 253 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 ZCCHC18P0CG32 403 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 HNRNPCL4P0DMR1 293 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 BMP4P12644 408 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 POLR2JP52435 117 aaKnown RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 DSCR9P59020 149 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 MAGOHP61326 146 aaKnown RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 CHRNB3Q05901 458 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 ZNF544Q6NX49 715 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 C17orf78Q8N4C9 275 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 ZIC4Q8N9L1 334 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 POMGNT2Q8NAT1 580 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 SLC38A5Q8WUX1 472 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 TMEM45BQ96B21 275 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 TMEM19Q96HH6 336 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 ZNF385AQ96PM9 386 aaKnown RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 TMEM45AQ9NWC5 275 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 THUMPD1Q9NXG2 353 aaKnown RBP13.49□□□□□ -0.25
TPM3-219ENST00000509409 PMF1-BGLAPU3KQ54 211 aa13.49□□□□□ -0.25
TPM3-219ENST00000509409 IGHV4-30-2A0A087WSY4 118 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 AQP7P3A6NL99 342 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 KLF11O14901 512 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
TPM3-219ENST00000509409 MVDP53602 400 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 GTDC1Q4AE62 458 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 ZNF311Q5JNZ3 666 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 C1orf140Q5VVS0 124 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 C11orf71Q6IPW1 123 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 DNM1P46Q6ZS02 220 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 MSANTD1Q6ZTZ1 278 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 MIER2Q8N344 545 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 VPS33AQ96AX1 596 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 SLC25A36Q96CQ1 311 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 OR52B2Q96RD2 323 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 AMBRA1Q9C0C7 1298 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 PIF1Q9H611 641 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 IFT52Q9Y366 437 aa13.48□□□□□ -0.25
TPM3-219ENST00000509409 C5orf58C9J3I9 102 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 ZNF500O60304 480 aaPredicted RBP13.47□□□□□ -0.25
TPM3-219ENST00000509409 VAMP5O95183 116 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 PRG2P13727 222 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 APOBEC3AP31941 199 aaPredicted RBP13.47□□□□□ -0.25
TPM3-219ENST00000509409 SLC25A3Q00325 362 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 HIKESHIQ53FT3 197 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 HMBOX1Q6NT76 420 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 NIPAL3Q6P499 406 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 SERPINA11Q86U17 422 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 OR10H5Q8NGA6 315 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 OR9I1Q8NGQ6 314 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 MAELQ96JY0 434 aaKnown RBP13.47□□□□□ -0.25
TPM3-219ENST00000509409 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 RAD21L1Q9H4I0 556 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
TPM3-219ENST00000509409 RPS6KB2Q9UBS0 482 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 MOKQ9UQ07 419 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 ANK3Q12955 4377 aaKnown RBP13.47□□□□□ -0.25
TPM3-219ENST00000509409 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
TPM3-219ENST00000509409 DSPPQ9NZW4 1301 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 A8MV72 311 aaPredicted RBP13.46□□□□□ -0.25
TPM3-219ENST00000509409 ZNF587BE7ETH6 402 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 GPRIN2O60269 458 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 AHSA1O95433 338 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 IFNA2P01563 188 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 GTF2E2P29084 291 aaKnown RBP13.46□□□□□ -0.25
TPM3-219ENST00000509409 SLC18A1P54219 525 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 UBE2NP61088 152 aaKnown RBP13.46□□□□□ -0.25
TPM3-219ENST00000509409 HOXC5Q00444 222 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 RNF220Q5VTB9 566 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 CREB3L2Q70SY1 520 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 MAVSQ7Z434 540 aa13.46□□□□□ -0.25
TPM3-219ENST00000509409 STK35Q8TDR2 534 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms