RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MDFIC2A0A1B0GVS7 189 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TCRBV7S3A2A0A539 114 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TCRBV7S2A1N4TA0A589 114 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TMEM129A0AVI4 362 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 CCDC151A5D8V7 595 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 MIF4GDA9UHW6 222 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 PPIAL4DF5H284 164 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 H3BNH8 94 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 K7EIL1 84 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 PRAMEF4O60810 478 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 IPO7O95373 1038 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 CECR9P0C854 216 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 PPIAL4FP0DN26 164 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 OR12D1P0DN82 309 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 IGHV4-38-2P0DP08 117 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 MLNP12872 115 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 ZNF37AP17032 561 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 PSMA4P25789 261 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 CALCRP30988 508 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 GP5P40197 560 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 EVX1P49640 407 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 LGALS4P56470 323 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 PROK1P58294 105 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 RPL15P61313 204 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 RPS23P62266 143 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 SLC25A3Q00325 362 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 GALK2Q01415 458 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 POU3F1Q03052 451 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 EMX1Q04741 257 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 HGFACQ04756 655 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 SLC3A1Q07837 685 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 NPRL3Q12980 569 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 SELENBP1Q13228 472 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 HERPUD1Q15011 391 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 PDK3Q15120 406 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 DEFB112Q30KQ8 113 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 NSUN5P1Q3KNT7 163 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 ALKBH6Q3KRA9 238 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TBRG1Q3YBR2 411 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 GLE1Q53GS7 698 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 TECRLQ5HYJ1 363 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 KLF17Q5JT82 389 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 CDKL4Q5MAI5 379 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 LIPJQ5W064 366 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 DHRS7BQ6IAN0 325 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 GDPGP1Q6ZNW5 385 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TMPPEQ6ZT21 453 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 C1orf174Q8IYL3 243 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 FAM9CQ8IZT9 166 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 SYCE1Q8N0S2 351 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TMEM86BQ8N661 226 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TEX9Q8N6V9 391 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 C11orf44Q8N8P7 122 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 DEFB108BQ8NET1 73 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 OR7G2Q8NG99 324 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 OR10S1Q8NGN2 331 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 MUC7Q8TAX7 377 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 PIGXQ8TBF5 258 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 WDR20Q8TBZ3 569 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 ZNF675Q8TD23 568 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 CCL17Q92583 94 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 DYRK2Q92630 601 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 ZNF75CPQ92670 426 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 PMM1Q92871 262 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 EXOSC8Q96B26 276 aaKnown RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 ZG16BQ96DA0 208 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TRIM44Q96DX7 344 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 CHMP6Q96FZ7 201 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 MRGPRX4Q96LA9 322 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 NPAS1Q99742 590 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TMEM79Q9BSE2 394 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 CHIAQ9BZP6 476 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 ZNF385DQ9H6B1 395 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 COQ10BQ9H8M1 238 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 NANOGQ9H9S0 305 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 MMP26Q9NRE1 261 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 MALT1Q9UDY8 824 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 OR5V1Q9UGF6 321 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 ADAM29Q9UKF5 820 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 NFU1Q9UMS0 254 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 TSC22D4Q9Y3Q8 395 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 WIPI2Q9Y4P8 454 aa3.27□□□□□ -1.89
RNF4-211ENST00000509206 SOX21Q9Y651 276 aaPredicted RBP3.27□□□□□ -1.89
RNF4-211ENST00000509206 RYR1P21817 5038 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 IGKV3D-15A0A087WSY6 115 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 TRAV40A0A0B4J280 105 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 IGHV1-69-2A0A0G2JMI3 117 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 ZNF816-ZNF321PA0A0X1KG74 233 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 BTBD17A6NE02 478 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 ANKRD61A6NGH8 418 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 TTC36A6NLP5 189 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 SUPT3HB4E1H0 165 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 ZNF587BE7ETH6 402 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 K7EPI3 171 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 NR5A2O00482 541 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 EFNA2O43921 213 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 GPR137BO60478 399 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 PLOD3O60568 738 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 SUPT3HO75486 399 aa3.26□□□□□ -1.89
RNF4-211ENST00000509206 SEMA3DO95025 777 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms