RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 OR5B2Q96R09 309 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 PRSS27Q9BQR3 290 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 TMPRSS13Q9BYE2 586 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 GSX1Q9H4S2 264 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 CALML5Q9NZT1 146 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 KLHL13Q9P2N7 655 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 TESMINQ9Y4I5 508 aa6.4□□□□□ -1.38
TOPBP1-207ENST00000509162 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 MEGF11A6BM72 1044 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 PRORSD1PA6NEY8 169 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 LIPT2A6NK58 231 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 A8MXE2 369 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 AIM2O14862 343 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 CYTIPO60759 359 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 PRSS23O95084 383 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 LGI1O95970 557 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 T-ENOLP0DO92 83 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 NCK1P16333 377 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 IL7RP16871 459 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 NUDT2P50583 147 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ANXA11P50995 505 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 POLR2HP52434 150 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 H3F3AP84243 136 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ID3Q02535 119 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 LGALS3BPQ08380 585 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 FAM27E3Q08E93 113 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 RBBP4Q09028 425 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 CYLC2Q14093 348 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 TSC22D1Q15714 1073 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ANKRD39Q53RE8 183 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 NHLRC1Q6VVB1 395 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 HACD2Q6Y1H2 254 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 TMPPEQ6ZT21 453 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 FCRLAQ7L513 359 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 LINGO2Q7L985 606 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF550Q7Z398 422 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 VTCN1Q7Z7D3 282 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 CCDC103Q8IW40 242 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 MCEMP1Q8IX19 187 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 TUSC5Q8IXB3 177 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 CADM2Q8N3J6 435 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 LSMEM1Q8N8F7 131 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ZIC4Q8N9L1 334 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 FAM156AQ8NDB6 213 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 RP9Q8TA86 221 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF563Q8TA94 476 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 VANGL1Q8TAA9 524 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 RNASE6Q93091 150 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 KTI12Q96EK9 354 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 CCT8L2Q96SF2 557 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF426Q9BUY5 554 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 RAD21L1Q9H4I0 556 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 BCO1Q9HAY6 547 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 MAN2C1Q9NTJ4 1040 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 COQ3Q9NZJ6 369 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 B3GAT1Q9P2W7 334 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF629Q9UEG4 869 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 PRSS50Q9UI38 385 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 ANGPT4Q9Y264 503 aa6.39□□□□□ -1.39
TOPBP1-207ENST00000509162 DNHD1Q96M86 4753 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 IGKV3D-15A0A087WSY6 115 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 EVPLLA8MZ36 301 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 C5orf58C9J3I9 102 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 FAM47E-STBD1D6RA91 191 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 M0QX08 132 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SYT5O00445 386 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 DVL2O14641 736 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF208O43345 1280 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PIP5K1CO60331 668 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PMS2P2O95744 297 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 HPRP00739 348 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 BGLAPP02818 100 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SEMG1P04279 462 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CD8BP10966 210 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 NAT2P11245 290 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ATP6V1B2P21281 511 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PRDX6P30041 224 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 UQCRC1P31930 480 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 GCKP35557 465 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 APOBEC1P41238 236 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC16A1P53985 500 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 UGT2B15P54855 530 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CDH12P55289 794 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 RGS8P57771 180 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 RAC3P60763 192 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PSME3P61289 254 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC25A3Q00325 362 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 LIPEQ05469 1076 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 MAPRE2Q15555 327 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 IQCCQ4KMZ1 466 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 FAM209AQ5JX71 171 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 WBP2NLQ6ICG8 309 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC46A3Q7Z3Q1 461 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 P4HA3Q7Z4N8 544 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ARMC8Q8IUR7 673 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms