RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 NCMAPQ5T1S8 102 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 DLEU7Q6UYE1 221 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 ABHD12BQ7Z5M8 362 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 ATG4DQ86TL0 474 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 ARMC8Q8IUR7 673 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 DPP10Q8N608 796 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 ZNF433Q8N7K0 673 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM99Q8N816 258 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 ZNF611Q8N823 705 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 OR52E4Q8NGH9 312 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 DNAJA4Q8WW22 397 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 AKAP1Q92667 903 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 CPPED1Q9BRF8 314 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM204Q9BSN7 226 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 TESQ9UGI8 421 aaKnown RBP16.47■□□□□ 0.23
UBE3D-207ENST00000509102 CHST2Q9Y4C5 530 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 FREM1Q5H8C1 2179 aa16.47■□□□□ 0.23
UBE3D-207ENST00000509102 KRT33AO76009 404 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 EDNRAP25101 427 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 AQP1P29972 269 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 RGS8P57771 180 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-207ENST00000509102 HOXC5Q00444 222 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 Q5PR19 223 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 KLHL17Q6TDP4 642 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 AAED1Q7RTV5 226 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 RANBP3LQ86VV4 465 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-207ENST00000509102 SLC30A8Q8IWU4 369 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 LSMEM1Q8N8F7 131 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 WFDC11Q8NEX6 87 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 OR9K2Q8NGE7 335 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 MFSD8Q8NHS3 518 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 RNF217Q8TC41 542 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 FBXW5Q969U6 566 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM45BQ96B21 275 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 ANKRD27Q96NW4 1050 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 CGREF1Q99674 301 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM120AQ9BXJ8 343 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 ZNF385DQ9H6B1 395 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM27Q9HBJ8 222 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 RASD1Q9Y272 281 aa16.46■□□□□ 0.23
UBE3D-207ENST00000509102 TMEM229AB2RXF0 380 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 OR2T1O43869 369 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 PLAUP00749 431 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 VIMP08670 466 aaKnown RBP16.45■□□□□ 0.22
UBE3D-207ENST00000509102 BSPH1Q075Z2 132 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 ALG10BQ5I7T1 473 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 ADAM5Q6NVV9 412 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 ULK3Q6PHR2 472 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 TMEM108Q6UXF1 575 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 POMGNT2Q8NAT1 580 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 SLC25A36Q96CQ1 311 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 PERPQ96FX8 193 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 RADILQ96JH8 1075 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 SH3GL1Q99961 368 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 IKZF5Q9H5V7 419 aa16.45■□□□□ 0.22
UBE3D-207ENST00000509102 OR6C65A6NJZ3 312 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 NPIPB7O75200 414 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 RPS5P46782 204 aaKnown RBP16.44■□□□□ 0.22
UBE3D-207ENST00000509102 ARFIP2P53365 341 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 MTPNP58546 118 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 CYLC2Q14093 348 aaPredicted RBP16.44■□□□□ 0.22
UBE3D-207ENST00000509102 MAPRE2Q15555 327 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 MMEL1Q495T6 779 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 INTS11Q5TA45 600 aaKnown RBP16.44■□□□□ 0.22
UBE3D-207ENST00000509102 FAM91A1Q658Y4 838 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 KLHL24Q6TFL4 600 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 C6orf89Q6UWU4 347 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 PRSS57Q6UWY2 283 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 C10orf111Q8N326 155 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 C17orf78Q8N4C9 275 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 C1orf162Q8NEQ5 155 aaPredicted RBP16.44■□□□□ 0.22
UBE3D-207ENST00000509102 OR52N5Q8NH56 324 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 SLC38A4Q969I6 547 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 SLC47A1Q96FL8 570 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 SLCO5A1Q9H2Y9 848 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 FAIMQ9NVQ4 179 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 MGAT4BQ9UQ53 548 aa16.44■□□□□ 0.22
UBE3D-207ENST00000509102 MTORP42345 2549 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 A0A1B0GWA3 101 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 MPGP29372 298 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 RPS4XP62701 263 aaKnown RBP16.43■□□□□ 0.22
UBE3D-207ENST00000509102 ADRM1Q16186 407 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 C1QTNF12Q5T7M4 302 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 FAM69AQ5T7M9 428 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 NET1Q7Z628 596 aaPredicted RBP16.43■□□□□ 0.22
UBE3D-207ENST00000509102 DEPDC4Q8N2C3 294 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 SLC26A7Q8TE54 656 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 EPYCQ99645 322 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 GSX2Q9BZM3 304 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 SLC7A10Q9NS82 523 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 FGFR1OP2Q9NVK5 253 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 LAMP3Q9UQV4 416 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 MAGED1Q9Y5V3 778 aaPredicted RBP16.43■□□□□ 0.22
UBE3D-207ENST00000509102 DSCAMO60469 2012 aa16.43■□□□□ 0.22
UBE3D-207ENST00000509102 AIM2O14862 343 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 TPST1O60507 370 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 ZNF43P17038 809 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 PTAFRP25105 342 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 NTF4P34130 210 aa16.42■□□□□ 0.22
UBE3D-207ENST00000509102 IL1RL1Q01638 556 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms