RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 RPS6KB2Q9UBS0 482 aa13.05□□□□□ -0.32
UBE2D3-228ENST00000508974 TRIM64A6NGJ6 449 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 TRIM64BA6NI03 449 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 ELOA3DA6NLF2 546 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 SMAD7O15105 426 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 TPST1O60507 370 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 CNOT4O95628 575 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 ITGA5P08648 1049 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 CDH2P19022 906 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 PTNP21246 168 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 PPIBP23284 216 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 ZNF83P51522 516 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 MAP2K6P52564 334 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 MTPNP58546 118 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 ELOA3BQ3SY89 546 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 TIMM23BQ5SRD1 257 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 TSPO2Q5TGU0 170 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 PRAMEF8Q5VWM4 474 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 PRAMEF7Q5VXH5 474 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 TMEM225Q6GV28 225 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 REEP3Q6NUK4 255 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 DHDDSQ86SQ9 333 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 ELOA3Q8NG57 546 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 FBXW5Q969U6 566 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 C18orf12Q96KH6 178 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 CPPED1Q9BRF8 314 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 TAS2R16Q9NYV7 291 aa13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 LEF1Q9UJU2 399 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-228ENST00000508974 AQP7P3A6NL99 342 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 TMEM229AB2RXF0 380 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 H7C1Q1 480 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 ABCD4O14678 606 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 ANGPT2O15123 496 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 AHSA1O95433 338 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 INHBBP09529 407 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 ETS2P15036 469 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 CBLP22681 906 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 SLC6A2P23975 617 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 HTR2AP28223 471 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 CDKN1AP38936 164 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 LGALS3BPQ08380 585 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 SELPLGQ14242 412 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 GABRA6Q16445 453 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 ZNF672Q499Z4 452 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 DLEU7Q6UYE1 221 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 KRT73Q86Y46 540 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 KDM8Q8N371 416 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 KTI12Q96EK9 354 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 USB1Q9BQ65 265 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 CXorf56Q9H5V9 222 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 ZNF385DQ9H6B1 395 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 PARPBPQ9NWS1 579 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 SEC14L4Q9UDX3 406 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 MALT1Q9UDY8 824 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 TRIM33Q9UPN9 1127 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 CORO2BQ9UQ03 480 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 NDUFAF1Q9Y375 327 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 CADP27708 2225 aa13.03□□□□□ -0.32
UBE2D3-228ENST00000508974 A0A1B0GWA3 101 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 M0R1B8 84 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 OPN1SWP03999 348 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 SOD3P08294 240 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 FOSL1P15407 271 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 GPX2P18283 190 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 GTF2E2P29084 291 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 CDH11P55287 796 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 ATP5J2P56134 94 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 NCALDP61601 193 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 RPS4XP62701 263 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 NFYCQ13952 458 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 ADRM1Q16186 407 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 CYP51A1Q16850 503 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 RUNDC3AQ59EK9 446 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 RETREG3Q86VR2 466 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 ZIC4Q8N9L1 334 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 SMAP2Q8WU79 429 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 IGFBPL1Q8WX77 278 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 WFDC6Q9BQY6 131 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 SPATA5L1Q9BVQ7 753 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 TMEM120AQ9BXJ8 343 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 GSX2Q9BZM3 304 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 TRIM2Q9C040 744 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 ANGPT4Q9Y264 503 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 MAGED1Q9Y5V3 778 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 USF3Q68DE3 2245 aa13.02□□□□□ -0.33
UBE2D3-228ENST00000508974 NPIPB7O75200 414 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 KRT33AO76009 404 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 PNMTP11086 282 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SELENOPP49908 381 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 P2RY4P51582 365 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms